Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0680 |
Symbol | |
ID | 4666440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 740868 |
End bp | 742913 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639821882 |
Product | nuclease |
Protein accession | YP_969055 |
Protein GI | 120609377 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCG TTACCAAAGC CGAAATCCAT GCCATCGAAA CCGCCGCGCC ACTGGAAGTG GCCGACCCGA CCAAGAACCT GATTCTTGTT CCGCTGTCGC AACTGTTGCC GCGCCGTTCC AAGCGCAACG TCCGCACGAC CCCGCGCCAG TCCATCCCCG AACTGGCCGC GAGCATCGCC CGCGTCGGCC TGCTGCAAAA CCTCATCGTC ATCCTGTCCG CCGATGGCGA ACAGTACGAA GTGGTGGCCG GCGACCGCCG CCTGACCGCG TTGAAGCTGC TGGCGAAGAA GAAGCGCATC GCCGCCGACT ATGAAGTGCC GTGCCTGCTG GTGGCCGATG CGTCCGCCCG TACCGTGAGC CTTGCCGAGA ACGTGCAGCG CGAGGCCATG CACCCCGCCG ACCAGTTCGC GGCCTTCGCC GCGCTGGTCA AGGAAGGCCG TCCCATCGAG GACATTGCCG CCGACTTCGG CGTGTCCCCG CTGGTGGTGC AGCGCCGCTT GAAGCTGGCG AACGTGTCGC CGCGCCTGAT GACGGATTAC CGTGCCAGTG GCGTAACGCT GGAACAGTTG ATGGCCTTGA CCATCACCGA CGACCACGCC GCGCAGGAAG CCGCGTTTTA CGGTGCGCCG GAATGGCAGC GCGGCGCATC CGCGCTGCGC GACCGCCTGA CCGAGCGTGA AATCACCGCC ACGCATCCGC TGGTGCGCTT CGTCGGGCTC GACGCCTACA CGGCAGCAGG CGGCGGCATC CGCCGCGACC TGTTCGCCGA AGGCGAAGCC GGAACCTATC TGACCGATGC GGCGCTGCTG GAAACGCTGG TGCGCGGCAA GCTGGACGCG CGGGCCGAGG ACGTGCGCGC CGAGGGTTGG GCATGGGTGG AAGCCGTGCC GCACATGAGC CACGCCGACC GGCAGGCGTT CCAGAACGCC CCGCGTCAGC GCCGCGAACC GACCGCCCGC GAAGCCCGCC GCATCGCTTC GCTGCAAACC CGTCTCGACA AGATCGACGC CGAACTGGAA GACGCCTACG ACGCCGAGGA CGAGGACAAG ACCGAGGCGC TGGAACCGCG CCGCGAACAG GTGGCCGGGG AACTGAAAGC CGTGGAGGAT GCCTTGCAGG GCTACGCCCC GGACGTGCGC GCCGTGGCCG GTGCCATCGT CACGCTCGAC ACCAGCGGCG AGGCCGTGAT TCATCGCGGC CTGCTGCGTG AAGCCGAGGC GAAGGCACTG CGCACGCTGG AAAAGCTGCG GCAGGGTTTC GGCGCAGGCG ACGGCGCGAG CGACGAGGAA GGCGACGACG CCGACGAAGC GCCCAAGACC GCGAGCCTGT CCGACCGGCT GACGCAACGG TTGAGCGCCC ATCGCACGGC GGCGCTGCAA ATCGAAGTCG CACGGCATCC GCATATCGCC TTGGCCGCGC TGGTGCATGG CATGGTGCGG GTCGTCCTGC AGGACGGCTA CCGCCGCGAT GGTTTGCCGC TCGGCGTGCG TCTGGACGTG CAAGACCGGC TGGAAGGCAT GGCCCCGGAC ATGCCGGAAT CGCCCGCCGC CGTGGCGCTG CGCACGTTGC AGGAAGTCGC AGGCGAAGGG TTGCCCGAGG ATAGCGCCGA ACTGTTTGCC GCGTTGCAAG CGAAGTCGCA AGACGAACTG GTGCACCTGC TGGCCGTGTG CGTGGCGTCC ACGGTGGACG TTGTGACGCC TCGCGCTTCA CAGCCCCAGC CCGGCACGGA ATTGGCGCAA GCCGTGGGGT TGAACATGGC CGCGTGGTGG AAGCCGACCG CCGAAGGTTA TTTCCGCCAC ATCGCCAAGC CCGTGATTCT GCAAGCCGTC AGCCAGTACG CCCCGGCGCA CGTCACCCGG CTGGCGAAGT TGAAGAAAGG CGACATTGCC AGCGAAGCGG AACGGCTGGC GGATGGCACA GGCTGGATGC CTGCCGTGTT CCACATCGAC CACAACACCG AGCCGGAAGG CGCACTTGCT GCGGACGAAG CGGATACGCC GGAAGATGCC GCCGACGAAG TGGAAGCGCA CGCGCTGGCC GCGTGA
|
Protein sequence | MNAVTKAEIH AIETAAPLEV ADPTKNLILV PLSQLLPRRS KRNVRTTPRQ SIPELAASIA RVGLLQNLIV ILSADGEQYE VVAGDRRLTA LKLLAKKKRI AADYEVPCLL VADASARTVS LAENVQREAM HPADQFAAFA ALVKEGRPIE DIAADFGVSP LVVQRRLKLA NVSPRLMTDY RASGVTLEQL MALTITDDHA AQEAAFYGAP EWQRGASALR DRLTEREITA THPLVRFVGL DAYTAAGGGI RRDLFAEGEA GTYLTDAALL ETLVRGKLDA RAEDVRAEGW AWVEAVPHMS HADRQAFQNA PRQRREPTAR EARRIASLQT RLDKIDAELE DAYDAEDEDK TEALEPRREQ VAGELKAVED ALQGYAPDVR AVAGAIVTLD TSGEAVIHRG LLREAEAKAL RTLEKLRQGF GAGDGASDEE GDDADEAPKT ASLSDRLTQR LSAHRTAALQ IEVARHPHIA LAALVHGMVR VVLQDGYRRD GLPLGVRLDV QDRLEGMAPD MPESPAAVAL RTLQEVAGEG LPEDSAELFA ALQAKSQDEL VHLLAVCVAS TVDVVTPRAS QPQPGTELAQ AVGLNMAAWW KPTAEGYFRH IAKPVILQAV SQYAPAHVTR LAKLKKGDIA SEAERLADGT GWMPAVFHID HNTEPEGALA ADEADTPEDA ADEVEAHALA A
|
| |