| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0649 |
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| Symbol | |
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| ID | 4667931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 700888 |
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| End bp | 702861 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639821854 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_969027 |
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| Protein GI | 120609349 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.222198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAGG AGGAGGGGGG CGCCCCCCGC AACGCTCCCG GGAGGACGGC AGGCTGGCGG
GTACCCGCCG CCCTGCTCCT GTACGCTGCC GCCGGGCTGG CCTGGGTGGC CGGCGCGGAG
GCGCTTTTGC CGGCCGGCAG CGTGCTGCGT GGAGCGCTGC AGGCGGCCTT CGTACTGGCG
CCGGCGGGCT GCGGCGTATG GGCGCTGCGG CGCTGGCGCG CGCGCGGCCG GGAGATCGCG
GTGCTGGCCC GCGGCGCCCT GCAGGCCGAC GAGCGCCAGC GGCTCGCGGC CACGGTGGTG
GACAACGCGG CCGAGGGCAT GGTGGTGACC GATGCCGAGA GCCGCATCCT GTCGGTGAAC
GCGGCCTTCA CGCGGCTCAT GGGGTACGGC GAGGCGGAAC TGCTGGGCCG CACGCCGCGG
CTGTTCAAGT CGGGCCGCCA CGGCCGCGCG TTCTACGAGG CCATGTGGGA AGAGCTGGGC
CGCACCGGGC ACTGGCAGGG CGAGATCTGG AACCGCCGCA AGAACGGCGA GGTGTTCCCC
GAGCGCATGT CGCTCTCCAG CGTGCGCAAT GCGCGCGGCG AGGTCACGCA CTACGTGTGC
CTGTTCACCG ACATTTCCCA GGAGCACGAG CAGCGGCGCC GGCTGGAGGT GATGGCCCAT
ACCGACCCGC TCACGGGCCT GCCCAACCGC ACGTTCTTCG CGCAGCAGCT CGAGGAAGCG
ATGGCGGACG CCCGCGCCCG CGGCGAACCG CTGGCGGTGC TGCTGGTCAA CCTGGACCGG
TTCAAGGATG TGAACGACAG CTACGGCCAC GCGGTGGGCG ACCAGGTGCT GCGCCACATC
GCCGCGCGCG TGCAGGAGGC GCTGCGGCCG GGCGACCTCG CGGGGCGGCT GGCGGGCGAC
GAGATCGGCG TGATCGCGCG CCGCGTGGAC GGGGCGCAGG GTGCGGTGGC GGCCGCGCGG
GCCCTGCTGG GCGCGCTGGC CGAACCCTGG CGCTCGCCCG ACGGCTTCGA GGTGGTGGCC
TCGGCCAGCG TGGGCATCTG CCTGTTCCCG GACCATGGCG ACACCGCCGA TGCGCTGCTG
CAGGGCGCCC ATGCGGCGGT GTACGGCGCG CGCGAGCACG GGCAGGGCGC ATGGCATTTC
TTCGACGAGA GCCTGACCCA GGCCGCGCGC GAGCGCCTCG CCCTGGAGGC GCGGCTGCGC
TCGGCGCTGG CCCAGGGGCA CCTGCAACTG CACTACCAGC CGCAGGTGGA CATCGCCTCC
GGGCGCATCG TGGGCGCGGA GGCGCTGGTG CGCTGGATCG ACCCGGTGGA GGGCTCCATC
GCGCCCGACC GCTTCATCCC GGTGGCCGAG CGCACGGGCA TGATCGGCCC GCTGGGCGAA
TGGGTGATGC AGGAGGCCTG CCGCCAGGCC CAGGGCTGGC GCGAGGCCGG GCTGCCCGAG
GTCACGGTGG CGGTGAACGT CTCCCCGCGC CAGTTCCACC TGACCGACCT GGCGGGCTGC
GCGGCCCTGG CGCTGGCGGA TTCCGGCCTG CCGTCCACGC TGCTGGAACT GGAGCTCACC
GAGGGTGCGC TGGCGGAGCG CCCCGAGGAG GCGCGCCAGG TGCTGCTGCG GCTGCGTGGC
CTGGGGCTGC GGCTGGCGAT CGACGACTTC GGCACGGGCT ACTCGTCGCT GGCGCACCTC
AAGCGTTTTC CGATCGATGT GCTGAAGATC GACAAGGGGT TCATCCGCGA CCTGCCGCAG
AGCGCGGACG ACATGGCGAT CTGCGCGGCC ATCATCGCCA TGGGGCACAG CCTGGGCCTG
GCGGTGCTGG CCGAGGGCGT GGAGACGCCG GAGCAGCTGG CGTTCCTGCG CAGCCGGGGC
TGCGACCGCT ACCAGGGCTA CCTGTGCCGC AGGCCGGTGC CCTCGGCGGA GTTCGCGGCG
CTGCTGGCGC AGCAGGCCGC GGGAGTTGAC GCGCCTTCGC CGGCCCAGCC ATAA
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| Protein sequence | MHEEEGGAPR NAPGRTAGWR VPAALLLYAA AGLAWVAGAE ALLPAGSVLR GALQAAFVLA
PAGCGVWALR RWRARGREIA VLARGALQAD ERQRLAATVV DNAAEGMVVT DAESRILSVN
AAFTRLMGYG EAELLGRTPR LFKSGRHGRA FYEAMWEELG RTGHWQGEIW NRRKNGEVFP
ERMSLSSVRN ARGEVTHYVC LFTDISQEHE QRRRLEVMAH TDPLTGLPNR TFFAQQLEEA
MADARARGEP LAVLLVNLDR FKDVNDSYGH AVGDQVLRHI AARVQEALRP GDLAGRLAGD
EIGVIARRVD GAQGAVAAAR ALLGALAEPW RSPDGFEVVA SASVGICLFP DHGDTADALL
QGAHAAVYGA REHGQGAWHF FDESLTQAAR ERLALEARLR SALAQGHLQL HYQPQVDIAS
GRIVGAEALV RWIDPVEGSI APDRFIPVAE RTGMIGPLGE WVMQEACRQA QGWREAGLPE
VTVAVNVSPR QFHLTDLAGC AALALADSGL PSTLLELELT EGALAERPEE ARQVLLRLRG
LGLRLAIDDF GTGYSSLAHL KRFPIDVLKI DKGFIRDLPQ SADDMAICAA IIAMGHSLGL
AVLAEGVETP EQLAFLRSRG CDRYQGYLCR RPVPSAEFAA LLAQQAAGVD APSPAQP
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