| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0644 |
|---|
| Symbol | |
|---|
| ID | 4667274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 694068 |
|---|
| End bp | 695237 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639821849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969022 |
|---|
| Protein GI | 120609344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0779934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGACG TGGTGGACAT GGCGCTGGGG GCGCCGGGAG GGGCGCCTGG CGCCGGGAGC
TGGGGCGTCG CCGAAGGCGG GGAGCGTAGC GAAGGGTACA GCCCCGGGAG TCCGGGCCGG
CCGGTGGCGG AGGATCCCAT GGAGAGCGCC ATCGCACAGC TGCGGCTGGC GTGGAGCCTC
AAGGACCCCG ATGTGACGGC GGACCGCTGG ATCGCGTCGG CCGAATGGCC TTTCCGCGCG
ATGGCCCTGG CGCTGGAGGC GCGGCGGCGC GTTCTCTGGG GGCGGCTGTC GGCCCTGGGG
GCGGCGCGCA TGCAGGCCCA GGGGGAGGCG CTGGGCACGG TGCTGGCCCT CGCGCGCCGG
CTGCCGCGCG GGATGGCGCC CACGCGCGGC GCGGGGCTGG GTGGCGCGCC GGAGCAGGGC
GCTCCGCGGC TGGAGGATCT GGCGGGAGTG GTGGGCCGTG CCACGGACCT TCGCAGCTAT
GGCTGGCAGG CCCTGTCTCC CGGAGCCATG GTGGCCTGGG CGCTGGGGCA TGGGGCCGGC
GCGCTGGGCA CGGCAGCGGA GAACCCGACC GTGGCCTGGC TGAGTGGCGG CCCCGTGCCG
GTGGCGAACG CGCAGGGGCC CTGCCTGGTG CTCGGGGGAG TGATCGACGC GGTGGTGCTG
CGTGCGCTGC GCGCCAGTGC GGAAGGCCGG GTGGACGAGG CGCTGGGAAT CGCCCGGATG
CACTCCGCAC CGCTGCAGGA CGCGGCGGAG CAGGTGGAGT GCGCCGCTGC CGTGCTGGAG
GCGATCGACC TGCGCGTGCA GGAAATCACC TGGCTGCTCG GGCGCCTGGA CGCGCGCCTC
GGTCCGGCGG CGCACCGCGC CGGGATCGTG CTGGCGCTGC GGGAGGCGCG CCAGGCACGT
TCCGTGGTTC CGCAGGGGCG TGGTTCGGGG CCCGGCCCGC AGGACACCGG GGCAGCCACG
GCGAAGGCGG CCGGGCCGGC GCTGGCGGGC CCCGCGCCGG AGCTGTTGCC GGGGGAGCGT
GCGGTGCTGG AAATGCTGAC AACGCTGGGC GGGGCGCTGT ACCGCACCGC GACGGTGCCC
CTGTTGGACG ATCTGGGCCG CCTGACACGG CAGAGCGGTG AAACGGTGGC CCGCATGCGG
CGCTGGCTGC TGATGACGCC GGAGGGATAG
|
|---|
| Protein sequence | MEDVVDMALG APGGAPGAGS WGVAEGGERS EGYSPGSPGR PVAEDPMESA IAQLRLAWSL
KDPDVTADRW IASAEWPFRA MALALEARRR VLWGRLSALG AARMQAQGEA LGTVLALARR
LPRGMAPTRG AGLGGAPEQG APRLEDLAGV VGRATDLRSY GWQALSPGAM VAWALGHGAG
ALGTAAENPT VAWLSGGPVP VANAQGPCLV LGGVIDAVVL RALRASAEGR VDEALGIARM
HSAPLQDAAE QVECAAAVLE AIDLRVQEIT WLLGRLDARL GPAAHRAGIV LALREARQAR
SVVPQGRGSG PGPQDTGAAT AKAAGPALAG PAPELLPGER AVLEMLTTLG GALYRTATVP
LLDDLGRLTR QSGETVARMR RWLLMTPEG
|
|---|
| |