Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0626 |
Symbol | |
ID | 4667694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 676973 |
End bp | 677965 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639821830 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_969004 |
Protein GI | 120609326 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA ATTTGCTGAA ACCCAAGACG ATCAACGTCG AGCAGCTCGG ACACAACCGC GCCAAGGTCG CGCTGGAGCC CTTCGAGCGC GGATACGGGC ACACGCTCGG CAACGCCATC CGGCGCGTGC TGCTGTCGTC CATGGTGGGT TACGCAGCAA CGGAAGTGAC GATCGCCGGC GTGCTCCACG AGTACTCGTC CATCGACGGC GTTCAGGAAG ATGTCGTGAA CATCCTGCTG AACCTGAAGG GCGTCGTGTT CAAGCTCCAC AACCGCGACG AGGTCACGCT GAGCCTGCGC AAGGATGGCG AGGGCGTGGT CACCGCCCGC GACATCCAGA CGCCGCACGA CGTGGAAATC GTCAATCCCG ACCACGTGAT CGCCCACCTG TCGCAAGGCG GCAAGCTGGA CATGCAGATC AAGGTGGAGA AGGGCCGCGG CTACGTGCCG GGCAACCTGC GCCGCTATGC CGACGAATCG ACCAAGTCGA TCGGCCGCAT CGTGCTGGAC GCCTCCTTCT CGCCGGTCAA GCGTGTGAGC TACACGGTCG AGAGCGCCCG CGTCGAGCAG CGCACCGACC TGGACAAGCT GGTCGTCGAG ATCGAGACCA ATGGTGCGAT CACCGCGGAA GATGCCGTGC GCGCCTCCGC CAAGATCCTG GTCGAGCAGC TCGCTGTCTT CGCACAGCTC GAGGGCGGTG AACTGGCCGC GTTCGACACG CCGGCCGGCC CGCGTGGCAG CGCCACGTTC GATCCGATCC TGCTGCGTCC CGTGGACGAG CTGGAACTCA CCGTGCGCTC GGCCAATTGC CTGAAGGCCG AGAACATCTA CTACATCGGC GACCTGATCC AGCGTACCGA GAACGAGCTG CTCAAGACCC CGAACCTGGG TCGCAAGTCG CTCAACGAGA TCAAGGAAGT GCTGGCTTCG CGCGGCCTCA CGCTGGGCAT GAAGCTCGAG AACTGGCCGC CGGCCGGCCT CGACAAGCGC TGA
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Protein sequence | MQTNLLKPKT INVEQLGHNR AKVALEPFER GYGHTLGNAI RRVLLSSMVG YAATEVTIAG VLHEYSSIDG VQEDVVNILL NLKGVVFKLH NRDEVTLSLR KDGEGVVTAR DIQTPHDVEI VNPDHVIAHL SQGGKLDMQI KVEKGRGYVP GNLRRYADES TKSIGRIVLD ASFSPVKRVS YTVESARVEQ RTDLDKLVVE IETNGAITAE DAVRASAKIL VEQLAVFAQL EGGELAAFDT PAGPRGSATF DPILLRPVDE LELTVRSANC LKAENIYYIG DLIQRTENEL LKTPNLGRKS LNEIKEVLAS RGLTLGMKLE NWPPAGLDKR
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