Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0621 |
Symbol | secY |
ID | 4667900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 673744 |
End bp | 675063 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639821825 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_968999 |
Protein GI | 120609321 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.468859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTACCA GCGCAGCGTC GATTGCAAAG ACCGGTAAAT TCGGCGACCT GCGTCGCCGG CTGGTTTTCC TGCTGCTGGC CCTGATCGTC TATCGCATCG GGGCGCACAT CCCGGTGCCG GGCATCGATC CGGCCCAGCT GCAGCAGCTG TTCAGTGGCC AGCATGGCGG TATCCTGAAC CTGTTCAACA TGTTCTCGGG CGGGGCCCTG TCCCGCTTCA CGGTGTTCGC ACTGGGGATC ATGCCGTACA TCTCGGCATC GATCATCATG CAGCTGATGA CCTACGTCGT TCCCACCTTC GAGCAATTGA AGAAGGAAGG CGAGGCCGGA CGCCGCAAGA TCACCCAGTA CACGCGCTAC GGAACACTCG GCCTGGCCAT TTTCCAGTCG CTCGGCATCG CCGTGGCGCT GGAGAGCTCC GCCGGCCTCG TGCTGAGCCC GGGCTTCGGC TTCCGCCTCA CCGCGGTGGT CAGCCTGACG GCAGGCACCA TGTTCCTGAT GTGGCTGGGC GAGCAGATCA CCGAGCGTGG CCTGGGCAAC GGTATCTCGA TCCTGATCTT CTCCGGCATC GCGGCCGGCC TGCCGAGCTC CATCGGCGGC CTGCTGGAGC TGGTGCGCAC GGGTGCGATG AGCATCCTGG CGGCGATCTT CATCGTGCTG CTGGTGGCGG CAGTGACCTA CTTCGTGGTG TTCGTGGAGC GGGGCCAGCG CAAGATCCTC GTGAACTATG CGCGTCGCCA GGTGGGCAAC AAGGTCTATG GAGGCCAGTC GTCGCATCTG CCGCTCAAGC TGAACATGGC CGGCGTGATC CCGCCGATCT TCGCGTCGTC GATCATCCTG CTGCCAGCCA CGATCGTGAA CTGGTTCAGC GCGGGTGAGT CGATGCGCTG GCTGCGCGAC ATCTCCGGTG CGCTGACCCC TGGCCAGCCC GTCTACGTGA TGTTCTATGC CGCCGCCATC GTGTTCTTCT GCTTCTTCTA CACGGCGCTG GTGTTCAACA GCCGTGAGAC GGCGGACAAC CTGAAGAAGA GCGGCGCCTT CATTCCCGGG ATCCGTCCCG GCGAGCAGAC GGCACGCTAC ATCGACAAGA TCCTGGTGCG GCTGACGCTG GCCGGCGCGG TGTACATCAC CTTCGTCTGC CTGCTGCCGG AGTTCCTGAT CTTGAAGTAC AACGTGCCGT TCTATTTCGG CGGCACGTCC CTGCTGATCA TCGTGGTCGT CACCATGGAC TTCATGGCCC AGGTGCAGAA CTACATGATG TCCCAGCAGT ACGAGTCGCT GCTCAAGAAG GCGAACTTCA AAGCAACACC AGGCACCTGA
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Protein sequence | MATSAASIAK TGKFGDLRRR LVFLLLALIV YRIGAHIPVP GIDPAQLQQL FSGQHGGILN LFNMFSGGAL SRFTVFALGI MPYISASIIM QLMTYVVPTF EQLKKEGEAG RRKITQYTRY GTLGLAIFQS LGIAVALESS AGLVLSPGFG FRLTAVVSLT AGTMFLMWLG EQITERGLGN GISILIFSGI AAGLPSSIGG LLELVRTGAM SILAAIFIVL LVAAVTYFVV FVERGQRKIL VNYARRQVGN KVYGGQSSHL PLKLNMAGVI PPIFASSIIL LPATIVNWFS AGESMRWLRD ISGALTPGQP VYVMFYAAAI VFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGEQTARY IDKILVRLTL AGAVYITFVC LLPEFLILKY NVPFYFGGTS LLIIVVVTMD FMAQVQNYMM SQQYESLLKK ANFKATPGT
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