| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0618 |
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| Symbol | rpsE |
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| ID | 4667814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 672559 |
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| End bp | 673077 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639821822 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_968996 |
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| Protein GI | 120609318 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.442649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGT TTCAACCCAA AGTGCAGACC GAAGGACAAG ACGACGGGAT GCGCGAGAAG
ATGATCGCGG TCAACCGCGT GACCAAAGTC GTGAAGGGCG GCCGTATCCT CGGCTTCGCT
GCACTGACGG TGGTCGGCGA CGGTGACGGC CGCGTGGGCA TGGGCAAGGG CAAGTCCAAG
GAAGTGCCTG CTGCCGTGCA AAAGGCGATG GAAGAATGCC GCCGCAACCT GGTGAAGGTT
TCGCTCAAGA ACGGCTCCAT CCACCACTCG GTGAAGGGCC ATCACGGCGC CGCTTCGGTC
GAACTGCATC CGGCTCCTAA GGGTACCGGC ATCATCGCCG GCGGCCCCAT GCGTGCTGTG
TTCGAAGTGG TGGGTATCAC CGACATCGTG GCCAAGAGCC ATGGTTCCTC GAACCCCTAC
AACATGGTCC GCGCCACGTT CGACGCGCTG GTGAACTCCA CGACCCCCGC GGAAGTGGCT
GCCAAGCGCG GCAAGTCGGT CGAAGACATC TTCGCCTGA
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| Protein sequence | MAKFQPKVQT EGQDDGMREK MIAVNRVTKV VKGGRILGFA ALTVVGDGDG RVGMGKGKSK
EVPAAVQKAM EECRRNLVKV SLKNGSIHHS VKGHHGAASV ELHPAPKGTG IIAGGPMRAV
FEVVGITDIV AKSHGSSNPY NMVRATFDAL VNSTTPAEVA AKRGKSVEDI FA
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