| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0617 |
|---|
| Symbol | rplR |
|---|
| ID | 4668678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 672177 |
|---|
| End bp | 672542 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639821821 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_968995 |
|---|
| Protein GI | 120609317 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.130788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCA AGAAAGAGCA GCGTCTTCGT CGTTCGCGCC AGACCCGCAT CCGCATTGCA
CAGCAAGGCG TGGTCCGTCT GACGGTGAAC CGCACGAACC TCCACATTTA CGCCAGCGTC
ATCTCCGAAG ACGGCAGCCG CGTGCTTGCC AGCGCATCCA CGGCGGAAGC CGAAGTGCGC
AAGGAACTGG GCGGCTCGGG CAAGGGTGGC AATGCCGCCG CGGCCCAGAT GATCGGCAAG
CGCATCGCTG AAAAGGCGAA GGCCGCCGGC ATCGAGAAAG TCGCATTCGA CCGCGCTGGA
TTCGCATATC ACGGCCGCGT GAAGGCCCTC GCAGAAGCCG CGCGTGAAGC CGGCCTGCAG
TTCTAA
|
|---|
| Protein sequence | MLTKKEQRLR RSRQTRIRIA QQGVVRLTVN RTNLHIYASV ISEDGSRVLA SASTAEAEVR
KELGGSGKGG NAAAAQMIGK RIAEKAKAAG IEKVAFDRAG FAYHGRVKAL AEAAREAGLQ
F
|
|---|
| |