| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0613 |
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| Symbol | rplE |
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| ID | 4667557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 670338 |
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| End bp | 670877 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639821817 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_968991 |
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| Protein GI | 120609313 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00554021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGAC TGCAACAACA CTACCGCGAA AAGATCGTTC CCGAACTCAC CAAGCAGTTC
GGCTACACCT CGCCGATGGA AGTCCCCCGC CTCACGAAGA TCACCCTGAA CATGGGTGTG
AGCGAAGCGG TGTCCGACAA GAAGGTCATG GACAACGCCG TGGCCGATCT GACGAAGATC
GCCGGCCAGA AGCCCGTCGT GACGAAGGCC AAGAAGGCCA TCGCCGGCTT CAAGATCCGC
GAAGGCCAGG CCATCGGCTG CATGGTCACG CTGCGCGGCG TCCAGATGTA CGAATTCCTG
GACCGTTTCG TGACCGTGGC ACTGCCCCGC GTCCGTGACT TCCGCGGCAT CTCCGGCCGT
GCCTTCGACG GCCGCGGCAA CTACAACATC GGCGTCAAAG AGCAGATCAT CTTCCCCGAA
ATCGAGTACG ACAAGGTGGA TGCCCTGCGC GGCCTGAACA TCAGCATCAC CACGACGGCC
AAGTCGGACG AAGAGGCCAA GGCCCTTCTC GCCGGTTTCC GTTTCCCCTT CAAGAACTAA
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| Protein sequence | MARLQQHYRE KIVPELTKQF GYTSPMEVPR LTKITLNMGV SEAVSDKKVM DNAVADLTKI
AGQKPVVTKA KKAIAGFKIR EGQAIGCMVT LRGVQMYEFL DRFVTVALPR VRDFRGISGR
AFDGRGNYNI GVKEQIIFPE IEYDKVDALR GLNISITTTA KSDEEAKALL AGFRFPFKN
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