Gene Aave_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0605 
Symbol 
ID4668669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp662499 
End bp663572 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content70% 
IMG OID639821809 
ProductABC transporter-related protein 
Protein accessionYP_968983 
Protein GI120609305 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TCCAGCTCGA TCTCGCGCAC TCGTACAAGC CGAACCCGCA GCAGGACAGC 
GATTACGCGC TGCTGCCGCT CTCTATGGAA TTCCGCGACG GCGGCGCCTA TGCGCTGCTC
GGCCCCTCGG GCTGCGGCAA GACCACCATG CTCAACATCA TGTCGGGCCT GCTCGCGCCC
TCGCAGGGCC GCGTGCTGTT CGACGGCCGC GACGTCACCC GCGCGAGCCC GCAGGAGCGC
AACATCGCCC AGGTGTTCCA GTTCCCGGTC ATCTACGACA CCATGACGGT GGCCGAGAAC
CTCGCCTTCC CGCTCAAGAA CCGCAAGGTG CCCGAGGCGC AGATCCGCCA GCGCGTGGGG
CAGATCGCCG AAATGCTGGA GATGAGCCAC CAGCTCGACA TGCGCGCCGC CGGCCTCTCC
GCCGACCAGA AGCAGAAGAT CTCCCTGGGC CGCGGACTCG TGCGCCCGGA CGTCTCGGCC
GTGCTGTTCG ACGAGCCGCT CACGGTGATC GACCCCCACC TCAAGTGGCA GCTGCGGCGC
AAGCTCAAGC AGATCCACTA CGAACTCAAG CTCACCCTCA TCTACGTCAC CCACGACCAG
GTCGAGGCCC TCACCTTCGC CGAAGAGGTG GTGGTGATGA CGCGCGGCCG CGCCGTGCAG
GTGGGCTCGG CGGATGCGCT CTTCGAGCGT CCCCAGCACG TCTTCGTCGG CCACTTCATC
GGCTCGCCCG GCATGAACTT CCTGCCGGCG CAGCTGGAAG GCGGCGGCCT GCGCATCGGC
GGCCAGGCCC TGCCGCGCCC CGCGCGCGAA CTGCCCGACG GCCCGCTGCA GCTCGGCGTG
CGCCCCGAAT ACCTCGCCGT GGTGCCCGAG GGCACCCCCG GCGCGCTGCC GTGCACGGTG
GACAAGGTGC AGGACATCGG CACCTACCAG CTGCTTACCG CGCGCCTGGA CGGCCAGCCG
CTCAAGGCCC GCGTCACGCC CGCCGAGGTG CTGCCCGCGC CCGGCGGCAC CGTCTGGCTG
CAGGTGCTGG GCGCCCACAC CTGCTTCTAC CGCAACGAGG AACTGTTGGC ATGA
 
Protein sequence
MARIQLDLAH SYKPNPQQDS DYALLPLSME FRDGGAYALL GPSGCGKTTM LNIMSGLLAP 
SQGRVLFDGR DVTRASPQER NIAQVFQFPV IYDTMTVAEN LAFPLKNRKV PEAQIRQRVG
QIAEMLEMSH QLDMRAAGLS ADQKQKISLG RGLVRPDVSA VLFDEPLTVI DPHLKWQLRR
KLKQIHYELK LTLIYVTHDQ VEALTFAEEV VVMTRGRAVQ VGSADALFER PQHVFVGHFI
GSPGMNFLPA QLEGGGLRIG GQALPRPARE LPDGPLQLGV RPEYLAVVPE GTPGALPCTV
DKVQDIGTYQ LLTARLDGQP LKARVTPAEV LPAPGGTVWL QVLGAHTCFY RNEELLA