Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0594 |
Symbol | |
ID | 4668164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 651313 |
End bp | 652278 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639821798 |
Product | LysR family transcriptional regulator |
Protein accession | YP_968972 |
Protein GI | 120609294 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCA CAGAACTCAA ATACATCGTC GCCGTTGCAC GGGAGAAGCA CTTCGGCCGC GCGGCGGACG CCTGCTACGT GTCGCAGCCC ACCCTTTCGG TGGCGATCAA GAAGCTCGAG GACGAGCTGG AGGTCAAGCT CTTCGAGCGC AGCGCGGGCG AGGTGTCGGT GACGTCGCTG GGCGAGGAGA TCGTGCGCCA GGCCCAGAGC GTGCTGGAAC AGGCCGCCGC CATCAAGGAA ATCGCCAAGC GCGGCAAGGA TCCGCTGGCC GGCGTGCTCA CGCTGGGCGT GATCTACACC ATCGGCCCCT ATCTGCTGCC CGAGCTGGTG CGGCACGCCA TCGCCCGCAC CCCCCAGATG CCGCTCATGC TGCAGGAGAA CTTCACCGTC AAGCTGCTGG AGATGCTGCG CACCGGCGAG ATCGACTGCG CCATCATGGC CGAGCCTTTC CCGGACACGG GCCTCGCCAT GGCGCCGCTC TACGACGAGC CTTTCCTGGC GGCGGTGCCC TCGTCCCACC CCCTCGCCGA GCGCAAGAGC ATCTCCGCTG CCGAACTCAA GAGCGAGACC ATGCTCCTGC TGGGCGCCGG CCACTGCTTC CGCGACCATG TGCTCGAGGT CTGCCCCGAA TTCGCGCGCT ACGCGAGCAA CGCCGAGGGC ATCCGCCGCA CCTTCGAGGG CTCGTCGCTC GAAACCATCA AGCACATGGT GTCCGCGGGC ATGGGCGTCA CGCTGGTGCC GCGCCTGTCC GTGCCGCGCG ACGCGCTGCA CACCGGCACC AAGCGCCGCA AGAGCGACGA CACCCACATC CGCTACCTCC CCATCGAGGA GGACGACGGC AGCCCGCCGC CCATGCGCCG CGTGGTCCTG GCCTGGCGCC GCAGCTTCAC GCGCTACGAG GCGATCGCGG CGCTGCGCAA CGCCGTGTAC GCCTGCGAGC TGCCGGGCGT CACCCGCCTT TCCTGA
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Protein sequence | MTLTELKYIV AVAREKHFGR AADACYVSQP TLSVAIKKLE DELEVKLFER SAGEVSVTSL GEEIVRQAQS VLEQAAAIKE IAKRGKDPLA GVLTLGVIYT IGPYLLPELV RHAIARTPQM PLMLQENFTV KLLEMLRTGE IDCAIMAEPF PDTGLAMAPL YDEPFLAAVP SSHPLAERKS ISAAELKSET MLLLGAGHCF RDHVLEVCPE FARYASNAEG IRRTFEGSSL ETIKHMVSAG MGVTLVPRLS VPRDALHTGT KRRKSDDTHI RYLPIEEDDG SPPPMRRVVL AWRRSFTRYE AIAALRNAVY ACELPGVTRL S
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