Gene Aave_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0580 
Symbol 
ID4668642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp633395 
End bp633808 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID639821784 
ProductPilT domain-containing protein 
Protein accessionYP_968958 
Protein GI120609280 
COG category[R] General function prediction only 
COG ID[COG5573] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG GTAAGGGCAA GGTGTTCCTC GACAGCAACG TGGTGCTCTA CCTGCTGTCC 
GAGGACGCGG CGAAGGCGGA CAGCGCCGAG GCGCTGCTGC ATCGTCGCCC GGTCATCAGC
GTCCAGGTAC TCAACGAGGT CACCCACGTC TGCGTGCGCA AGCTGAAGAT GGGGTGGGGA
GAGGTGGGTC AGTTCCTGGC GCTGGTGAGA GAGTTCTGCA GCATTGTTCC GCTCACAGTC
GAGGTGCACG ACCGGGCCCG CCAACTGGCC GAGCGGCACC AGCTGTCGTT CTACGACGCA
TGCATTGTGG CGGCCGCCGC AGCCGAAGGC TGCCAGACGC TCTACTCCGA AGACATGCAC
CATGGCCTCA TCATCGAAGA GAGCCTGTCG ATTCGTAACC CGTTCAACGT TTGA
 
Protein sequence
MAAGKGKVFL DSNVVLYLLS EDAAKADSAE ALLHRRPVIS VQVLNEVTHV CVRKLKMGWG 
EVGQFLALVR EFCSIVPLTV EVHDRARQLA ERHQLSFYDA CIVAAAAAEG CQTLYSEDMH
HGLIIEESLS IRNPFNV