Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0580 |
Symbol | |
ID | 4668642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 633395 |
End bp | 633808 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639821784 |
Product | PilT domain-containing protein |
Protein accession | YP_968958 |
Protein GI | 120609280 |
COG category | [R] General function prediction only |
COG ID | [COG5573] Predicted nucleic-acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGG GTAAGGGCAA GGTGTTCCTC GACAGCAACG TGGTGCTCTA CCTGCTGTCC GAGGACGCGG CGAAGGCGGA CAGCGCCGAG GCGCTGCTGC ATCGTCGCCC GGTCATCAGC GTCCAGGTAC TCAACGAGGT CACCCACGTC TGCGTGCGCA AGCTGAAGAT GGGGTGGGGA GAGGTGGGTC AGTTCCTGGC GCTGGTGAGA GAGTTCTGCA GCATTGTTCC GCTCACAGTC GAGGTGCACG ACCGGGCCCG CCAACTGGCC GAGCGGCACC AGCTGTCGTT CTACGACGCA TGCATTGTGG CGGCCGCCGC AGCCGAAGGC TGCCAGACGC TCTACTCCGA AGACATGCAC CATGGCCTCA TCATCGAAGA GAGCCTGTCG ATTCGTAACC CGTTCAACGT TTGA
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Protein sequence | MAAGKGKVFL DSNVVLYLLS EDAAKADSAE ALLHRRPVIS VQVLNEVTHV CVRKLKMGWG EVGQFLALVR EFCSIVPLTV EVHDRARQLA ERHQLSFYDA CIVAAAAAEG CQTLYSEDMH HGLIIEESLS IRNPFNV
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