Gene Aave_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0575 
Symbol 
ID4668582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp625054 
End bp625431 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID639821779 
Productendoribonuclease L-PSP 
Protein accessionYP_968953 
Protein GI120609275 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT TCGCACTTCA TCGCTTCCAC ACCAATCCTC GCATGAGCAA GGTGGTGGCG 
TTTGGCCCCC TCGTGTTTCT GAGCGGGCAG ACCGCCAGCG GCTCGCCCGC CACGTCCTTC
GATGAGCAGA TGCAGGAGGT TCTGGATCGC ATCGATGCCC GTCTGGCGGA TGCGGGCTCG
GACAAGCAAT CGCTCCTGTC CGTGACGGTC TACCTGCGGA ACATGGAAGA CTTCGCGGCG
ATGAATGCTG CCTGGGAGCG GTGGATCGCC CCGGGAACCG CCCCGGCACG CTGCACCGTG
GAGGGGCGCA TAGCCTCCCC ACACCTGCTG ATCGAGATCT CCGCCATCGC CGCCACGTCG
GCGTCCATCC ACCCCTAA
 
Protein sequence
MTAFALHRFH TNPRMSKVVA FGPLVFLSGQ TASGSPATSF DEQMQEVLDR IDARLADAGS 
DKQSLLSVTV YLRNMEDFAA MNAAWERWIA PGTAPARCTV EGRIASPHLL IEISAIAATS
ASIHP