| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0567 |
|---|
| Symbol | |
|---|
| ID | 4669756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 614328 |
|---|
| End bp | 614555 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639821772 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_968946 |
|---|
| Protein GI | 120609268 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAG CAGCCAGCCA GACCACCAGC CAGGCGGACG ATGCGCCCAC CAGCCGACGC
GTCCTGCGGC GGCCGTTGGT CGAGCAGCGT ACCGGCTTCA AACGCGCGCA CATCTACAGC
CTGATGAAGG AGAAGAAGTT CCCACAGCGC GTGCGGCTGG GCGTGCGCGC TGTGGGCTGG
TACGAGGATG AGATCGATCA GTGGCTCGCC CAGCGGGAGC GTGCATGA
|
|---|
| Protein sequence | MSSAASQTTS QADDAPTSRR VLRRPLVEQR TGFKRAHIYS LMKEKKFPQR VRLGVRAVGW
YEDEIDQWLA QRERA
|
|---|
| |