Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0563 |
Symbol | |
ID | 4669742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 609805 |
End bp | 611040 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639821768 |
Product | hypothetical protein |
Protein accession | YP_968942 |
Protein GI | 120609264 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCGC CCGGGAAGCC GCGGCCGCCC GGCCCCCGTT CGCTGTCGGA CGTATTCGAC GCGGCCTGCG AACAAGCGCA GCCCGCGGAG TTACCCGCTG CAACGCCGGC TGGCAAACCC GGGGGGCAGG ACGGCTTTCT GTTCAGCGGC AACCGCCACG AGAGCGTGCC GCGCGCGTTG TTCCTGGACC GCCGGCTGAC GCCGCTCGAA CGCAACGCAT GGCAGGTCAT CCGGATGCAG TTGAATGTGG ATGGCCTGAC GGCGCTGCCC ACCTACGATC AGTTGCGCCC CATGCTCGCC GTCATGCCCT GCGGTCCCGT GGCGTCCACG GAAACCGTCG CGCGGGCATT GACGCTGCTG CGACTGACGC GCTGGCTCAG CCTCGTGCGG CGACGCCGCG ACCAGCGCAG CGGCCGGATC ATGGGCAATC TCTACGTGCT GCACGACGCG CCGCTCACCC CTTTTGAAGC AATGCAGCTG GATGCCGACT ACCTCGGGCT GGTCAGCCAG GCGCTGACCC ATGCGAGCAA GGCCGTGCAG TCCGTGGGAC ACCATGTGCT GCAGGAGGTC GCTGACGACC CGATGCTACG CGGCGGCGTT CTGCCCACGC GCCTGCAGGT GCTTACGGCG CAGTTGGCCG ATGGGGTGCA GCAGCCGCAA ACGCAGGGGG AAAGTTACCC ACAGGATGCG CACACTGGCG ATTCCGAAGG AGGTCGAGCA AGCCTGCTTC GGATTCCTGA CCAGCCGTCT TCGGATTCCG AATCAGGCCG GAAACCCGCG CCAGAGCGCT CTCTTCGGAA TCCGAAGGAG GCCCGTACTG GTAGTTTTCG TATAGGAGAA CGTACTGTAC TGCGCGAGCG CGCGATGGAC GGCGTGCGCC TGCCGGCCGA ATTTCTCAGC CTGAAGGACG AGCAGCAATC GGGCGCACTG GTCGCCCTGC GGCAAGTAGC GCAGGAACAG CGCCAGGCCG TGATGGACGA GTGGGTCGCG CGATGCCGTG ACAGTGCTGT GCGCAATCCG GCGGGCTATC TCTTCGGGCT CATCCAGCGG GCCCTGCGTG GCGAGTTCAG GGCGTGGGCC GGAGCGGGGA ATGCCAAGGC ACCCGCGCCT GACGCACCAC CACCTGCCCC GCCTCGACCA CCACCTCCGC CCTCCGCCCC GGCGCCGAAG CCCGCGAGCC CGGAAGTGGC TCGGGCGCAC CTGGAGCGGC TGCGCGCGAT CCTGCGCGGC GGTTGA
|
Protein sequence | MAAPGKPRPP GPRSLSDVFD AACEQAQPAE LPAATPAGKP GGQDGFLFSG NRHESVPRAL FLDRRLTPLE RNAWQVIRMQ LNVDGLTALP TYDQLRPMLA VMPCGPVAST ETVARALTLL RLTRWLSLVR RRRDQRSGRI MGNLYVLHDA PLTPFEAMQL DADYLGLVSQ ALTHASKAVQ SVGHHVLQEV ADDPMLRGGV LPTRLQVLTA QLADGVQQPQ TQGESYPQDA HTGDSEGGRA SLLRIPDQPS SDSESGRKPA PERSLRNPKE ARTGSFRIGE RTVLRERAMD GVRLPAEFLS LKDEQQSGAL VALRQVAQEQ RQAVMDEWVA RCRDSAVRNP AGYLFGLIQR ALRGEFRAWA GAGNAKAPAP DAPPPAPPRP PPPPSAPAPK PASPEVARAH LERLRAILRG G
|
| |