| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0562 |
|---|
| Symbol | |
|---|
| ID | 4669729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 608648 |
|---|
| End bp | 609481 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639821767 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968941 |
|---|
| Protein GI | 120609263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA CCCCCAACAC CCCTGCCCTG CAGCTCAACC TCGGCTCGCT GCGCAGCGCG
ATGTCGCTGA CGCTGCACAC CCACCACGCA TCCCGGATCT GGCACGGCCG CGCACCGGCG
GAAGGCCGTC CGGGCATCGT CGGCCTCAAT GGCTACATCG CCGTGATGAA CAAGATGAAG
CGCGGCGCGG AGCAGGACGA TCCGTACTCG GACTGGTGGA TGCTGCGCAT CGAGGAGAAG
CTGTCGCAGA CCGACATCGC CCTGCGGCAG TTGCGCGAGC AGGTGGACCG CGCGCTCACC
GGCGTACCGG CCGCGCTGTC GCTGGGCGAA AACCTCAACG TGCAGCCGAT CCGCCTTCCG
CTCTTCGTCA ACGCGCAACT GGGCTTCATG GCCGTCTATC TCCTGGCCGA CTACGACGAA
CTGGCGCGCA AGCTCATCCT GGCGCACCAC ACCGCGCTCA TCGATCGCTC CACGCTGGAG
CGCTGGCTCA ACGAGGGTGC CCATGCGCTG CGCAGCCTGT TCTCCCTGGC GCAGCAGTAC
CGCTACTCCG GCTGCACCCG TGACGACTTC GCCGCGAAGA ATGCCGCAGC GCGGGCGGCG
CTGGAGAAGT ACGGCGAACT GCCGCAGGAC GTGCTCGAAG GCACCCGCCG CTCGCGCTAC
GCGCCGCCCA TCGTCCGCCG CTCCGGCCTG GCCCGCACGA CCAGCGCGCC GGCCGAGGAC
ATCGAGCCTG CGGAGTCCGG CAGTGCCGCG GCGCTGGGGA CAGGTGACGC TGCAGGCCAC
GACAGCGCGA CTGCGGCGCC CGACGGCAAC GATGATGAAG ACACCGCGCC ATGA
|
|---|
| Protein sequence | MAETPNTPAL QLNLGSLRSA MSLTLHTHHA SRIWHGRAPA EGRPGIVGLN GYIAVMNKMK
RGAEQDDPYS DWWMLRIEEK LSQTDIALRQ LREQVDRALT GVPAALSLGE NLNVQPIRLP
LFVNAQLGFM AVYLLADYDE LARKLILAHH TALIDRSTLE RWLNEGAHAL RSLFSLAQQY
RYSGCTRDDF AAKNAAARAA LEKYGELPQD VLEGTRRSRY APPIVRRSGL ARTTSAPAED
IEPAESGSAA ALGTGDAAGH DSATAAPDGN DDEDTAP
|
|---|
| |