Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0558 |
Symbol | |
ID | 4669715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 604492 |
End bp | 606534 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821763 |
Product | DNA topoisomerase III |
Protein accession | YP_968937 |
Protein GI | 120609259 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTG TTCTGTGCGA GAAGCCCTCC CAAGGCAAGG ACATCGCGAG GGTCCTGGGC GCACGCCAGC GTGAAGCGGG CTGCCTGGCC GGGCCGGGCA TCAAGGTCAC CTGGGGCATC GGCCACCTGA TCGAGGCTGC GCCCCCGGAG GCCTACGGCG AGCACTTTCA GCGCTGGTCG CTGGAGACGC TGCCGATCGT TCCACAGCAG TGGCGGTGGG TGGTCAAGGC CGACACCGCC TCGCAATTCA AGGTCGTCCA GCGCCTGCTG GCACAGGCGT CCGAACTCAT CATTGCCACG GACGCCGATC GCGAGGGCGA GATGATCGCC CGCGAGTTGA TCGAGTACTG CGGATACCGC GGACCCATAC AACGGCTATG GCTCTCCGCG CTCAACGATG CGTCGATCCG CAAAGCGCTG GGCGCCCTGC GGGCATCGCA CGAAACGCTT CCGCTGTACC ACTGCGCGCT CGCGCGCTCC CATGCGGACT GGCTCGTCGG CATCAATCTC ACGCGCCTGT TCACGCTGCT GGGGCGCAAG GCCGGTTTCG ACGGGGTGCT TTCGGTGGGC CGCGTGCAGA CGCCCACCCT CAAGCTGGTC GCTGACCGCG ATCGGGAGAT TGCGGCGTTC GTTCCGGTCC CGTTCTGGTC CATCGAGGTC TCGCTCTCGG CGGGCGCGCA GGCGTTCTCC GCACACTGGG TTCCACCTGC AACCGTCACG GACGCTGCAG GCCGGTGCTT ACAGCAGAGC GCGGCTCAAC ACGCGGCGGC CGCCGTCCGC ACGGCCGGGC ACGCGCAGGT CACGGGCATT GATACCGAGC GTGTGCAGGA AGGCCCTCCG CTTCCGTTCG ACCTCAGCAC GCTGCAGGAA GTCTGTTCAC GGCGTCTCGG CCTCGACGTG CAGGAGACGC TCGACATCGC CCAGGCCTTG TACGAGACGC ACAAAGCGAC GACGTATCCG CGCACCGACG CGGGCTATCT GCCAGAGAAC ATGCTCACCG AGGTTCCCAC CGTCATCCGG AGCCTGTTGA AGACGGACCC GGCGCTGCAA CCGCTCATGC AGCGCCTCGA CCTGGGTCAG CGCTCCCGCG CCTGGAACGC CACCAAGATC GCGGCCCACC ACGCCATCAT CCCGACGCTG GAGCCTGCCG ACCTGTCGAA GATGTCCGAG AAGGAACTGG CCGTGTACCG GCTCATCCGC GCCCACTACC TGGCCCAGTT CCTTCCCCAC TATGCCTATG ATCGAACGAT GGTGCGCCTC GCATGCGGCG GCCAAGCGCT GCAGGCGTCC GGGAAGCAGG TCGTCGATGC GGGCTGGAAG GCCGCGTTCG CTGCTCCCTC GATCCCCGGT GCAGGGGCGG AGACTCCCGA AGCCGAGACG GACAGCGAAG CTCCGCGCGA CCAGGCGCTG CCGACACTGC ACGAAGGGAT GGCCTGCGAG GTCAGGTCGC TCGATCTGAA GTCGCTGTAC ACCAAGTCTC CGCCCCCCTA CACCCAGGGC GAGCTCGTCA AGGCGATGAA GACCGTCGCC AAGCTCGTCA CCGATCCGCG ACTGAAGCAA ACGCTGAGGG ACACCACGGG CATCGGAACG GAGGCGACGC GCGCGAACAT CATCAGCGGG TTGCTCGCGC GCGGGTTCCT GGTGCGCAAG GGCCGCGTGG TTCGCGCATC CAAGACCGCG ATGACGCTCA TCGACGCAGT TCCCGCAGCG ATTGCGGACC CCGGCACCAC GGCAATATGG GAGCAGGCGC TGCACATGAT CGAGGCGCGC ACGATGGACC TCGACACGTT CGTCTCGAAG CAGGCCGCAT GGGTTTCGCA GCTGGTCGAA CAGCATCGCG AAGCGACCCT CGCGATCCGC GTTCCTGCGG GTCCGCCATG CCCGCTCTGC GGTGCCGCAA CGCGCAAGCG CACCGGCAAA ACCGGAGCCT TCTGGTCCTG CTCCCGCTAT CCTGACTGCA AGGGTACCGT TGCGATCGAT TCCGCCGAAG CGGGCCGGCG CAACGGGCCG CGCAAGCCGC GCGCCGCCCG AAAGCTTCAC TAG
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Protein sequence | MRVVLCEKPS QGKDIARVLG ARQREAGCLA GPGIKVTWGI GHLIEAAPPE AYGEHFQRWS LETLPIVPQQ WRWVVKADTA SQFKVVQRLL AQASELIIAT DADREGEMIA RELIEYCGYR GPIQRLWLSA LNDASIRKAL GALRASHETL PLYHCALARS HADWLVGINL TRLFTLLGRK AGFDGVLSVG RVQTPTLKLV ADRDREIAAF VPVPFWSIEV SLSAGAQAFS AHWVPPATVT DAAGRCLQQS AAQHAAAAVR TAGHAQVTGI DTERVQEGPP LPFDLSTLQE VCSRRLGLDV QETLDIAQAL YETHKATTYP RTDAGYLPEN MLTEVPTVIR SLLKTDPALQ PLMQRLDLGQ RSRAWNATKI AAHHAIIPTL EPADLSKMSE KELAVYRLIR AHYLAQFLPH YAYDRTMVRL ACGGQALQAS GKQVVDAGWK AAFAAPSIPG AGAETPEAET DSEAPRDQAL PTLHEGMACE VRSLDLKSLY TKSPPPYTQG ELVKAMKTVA KLVTDPRLKQ TLRDTTGIGT EATRANIISG LLARGFLVRK GRVVRASKTA MTLIDAVPAA IADPGTTAIW EQALHMIEAR TMDLDTFVSK QAAWVSQLVE QHREATLAIR VPAGPPCPLC GAATRKRTGK TGAFWSCSRY PDCKGTVAID SAEAGRRNGP RKPRAARKLH
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