| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0556 |
|---|
| Symbol | |
|---|
| ID | 4669712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 600455 |
|---|
| End bp | 601996 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639821761 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968935 |
|---|
| Protein GI | 120609257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGT CGTGGCAGCC GTATCAGGGT GCGCACGCGC AAACACATAC GATGCCAACG
AACACATCAG TGATTGCCCG CCTTGGCGTC CATAGTCCCG TACCGCAAAA TATCTTGAGG
GAGGAACACC GATTGACACA CACTACTGAA GACAAGACCA TCCTGAGCGG CCCGCTCGAC
GAATGTGAGG AGCGACTTCT TGGAGTCCTC GATTTCGCAA TCGGCTTCGC CAAGCAACAG
GGGGCGCCTC TTGCACTGAA TGCTTCCCAG TACCACAGGC CGCATTTACT GGCTCTGCTG
GATCCCTCCG CGGTCGAAAT GCTCGTCGCC GGGGAGACTG TGAGCATTAG CTCTGGCCCG
TCCTTGAGGC TGATTGATGA CGCAGGGGTC GGAAACTTTG GGGGGTTGGT GCTGTTCGTT
GGCGTTGACT CCCCAAGGCT CGCATTGCTC AAGGCTGATC GCCGACCGAT GGTAATTGCA
GTGCCGGAGA ACGACGGGGA ACACTCAGCG ATCCTCGAAA CTTTCCCGAA CGCCGGACGT
TTAGAGACCA AGCCGGAACC CGAGATAATT CCGTTACCAG CAATGCATCA ATCATATGAC
TCCAAATGCC AATGGCTGGA CGAGCGTTAT GACGTCATTG CTGGGCACAA CTTCAACCGA
AAGTCGGCGG AAATAGTTCT TGGCACTGGT GAACCTCAGG TTTGCCGCTA CTGTGGCAGG
TCCACTCCAG CGACGACCTT TGAAAACGTC TCGCATGCCT TCCCTGAGCA AATTGGAAAT
AAGTGGCTCG TAGACAGTCG CGAATGCGAC GGCTGTAACG AGCATTTTGC TTCAGCCATC
GATAGCCCGT TCGGAAACTG GTCTTTACTA GCGCGCTCCA CTGGCCGGAT CCGTGGGAAA
AAGAAAGTAC CCACATTTGT CAGCACAGGC GAGGATTTTC GGATCGCTTT CAAAAATAAC
GTTCTGAACG TAACAGCCCA CAAAGACGAC CCTAGGCTTC ATTTTGACGA GAACGCAAAG
CGTATTGAAA TGCGACTGGA ACGCCCCCCA TATGTACCAA TGGGCGTTTT CAAGAGCTTC
GTGAAAATGG CAATTTCGGT GATGCCCGAA GTCGAGGCCA ACAAGTGCCA GCATCTTAAG
AACTGGATCT TAGAGAAGAA GCACACCTTC GAAAGCTTCC CGTTCCATCC GCTTATGCTG
TACACCCAAT TCATCAGTGG ACCAATTCCT AATGATGCAA TCAGCTTCAT GCTGGTCCGC
AGAAAGGAAT CGGTCTCTGG CTGCCCCTAC ATGATGTTCA TGGTTCAGTA CGGCAATCAT
GTCCACCAAA TCGCGTTGCC GATGCCGACA GAGGACGGCA TGGGTCGTGA ACCTATGCAG
ACATCCCTCG TCTACTTTCC GCATCCGTGG GAAGCAGCGG ACCACATCGC TGCTTATGGA
CCGGCTCGGT GCGTCGAAGA AGATCTGTCG TCACCGGAAT TCAGGCGCAA TGAGCCATAT
CCGATGAACT TCAGTTTCTC CGAGGCTATA AGCACAATGT AG
|
|---|
| Protein sequence | MSLSWQPYQG AHAQTHTMPT NTSVIARLGV HSPVPQNILR EEHRLTHTTE DKTILSGPLD
ECEERLLGVL DFAIGFAKQQ GAPLALNASQ YHRPHLLALL DPSAVEMLVA GETVSISSGP
SLRLIDDAGV GNFGGLVLFV GVDSPRLALL KADRRPMVIA VPENDGEHSA ILETFPNAGR
LETKPEPEII PLPAMHQSYD SKCQWLDERY DVIAGHNFNR KSAEIVLGTG EPQVCRYCGR
STPATTFENV SHAFPEQIGN KWLVDSRECD GCNEHFASAI DSPFGNWSLL ARSTGRIRGK
KKVPTFVSTG EDFRIAFKNN VLNVTAHKDD PRLHFDENAK RIEMRLERPP YVPMGVFKSF
VKMAISVMPE VEANKCQHLK NWILEKKHTF ESFPFHPLML YTQFISGPIP NDAISFMLVR
RKESVSGCPY MMFMVQYGNH VHQIALPMPT EDGMGREPMQ TSLVYFPHPW EAADHIAAYG
PARCVEEDLS SPEFRRNEPY PMNFSFSEAI STM
|
|---|
| |