| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0555 |
|---|
| Symbol | |
|---|
| ID | 4669709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 598205 |
|---|
| End bp | 599776 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639821760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968934 |
|---|
| Protein GI | 120609256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA TTCGACTTCA GACCAATCAG CACCGCCTGA TCGCCAACCT GCGGCACGCC
TTCAACCAGC GCTCCATGCT GGGGGAACTG TTGCAGAACG CCCGCCGCGC CCAGGCGAGC
GATATCCGCA TCTACGTCAC CGACGACTGC ATTGCCGTCC ACGACAATGG CAGCGGCATC
GAAGATCTCC AATCGCTCAT CCACATCGCC GAATCAGGCT GGAAGGCCGT CATAAGGGAG
CGCGAGAACG CCTTCGGCAT GGGAGCGCTC GCCACGCTGT ACTTCGCCGA ACGGCTGATG
GTGCGGTCAC GCGGCCAAAC CTTTTCCGCA CGAACCGCCG ACATCCTTGC CGGAAACCCG
ATCGAGGTCC TGCCGGCAGA TGGCACTTGG CAGGGCACGC AGATCCAGCT CGACGGCGTA
CGCTCACCAG ATCGCCACGT CTTCCTGCCG GACTGGGTGC GCTCGGAAAT GCGGCGACTG
TGCGAGGCAT TCCCGGTCAG GGTGTACGTC AATGATGTCG AAGTCCCCAG GCCCCTGGCA
AAGCCCGATA TTCGATGGCG TGAGACGTCC ATGGGCAAGG TACTGATCGA CCTGCATGGC
GCCACGAACC AGTGGCGATG CTTCCTCCAG GGGCTGCCCA TCCAGGTGGG AAGCTCGTAT
GCACCGAAAC AGATCGTGCT GCTGCCGGAC GACATGGTCG CCAAGCTCCC TGATCGCCAG
CATCTGCTGA ACGAAACCAG CGATATTCCT CGTATCCAGG CCGCCGTGAA TCAAGCCTAC
CGCCAAGCCT TGATGGACGC GAAGTCCGAG CTGGCCGGTC ACGAGTTCGC CGAGTGGTAT
GCCGACGCAT GCGTCATTTC CTCCAACGCC GACCTCCTCA ACGATGTTCC CTTCGTGCCG
CGCGCCTGGT TTCGCAACTG GAAAGACCGG CCAGCCGGGG TTTGCCGGTA TTGGGAACAT
TACGGTGACG ACGGAGTGAC TTCCGCGGAC GCAATGTCGG AAGCCGGGGT CTGGCGGATC
GAAGACGATG ATGGCGATGT GCTGTTGGCT GAGGTGTTTC TGCAGGCGGC GGACGCCTAT
TTGTTGGAAC AAATCAACCT GGATGCAGGC CACTGGCTTC TTCGTCTGGC ACGCCCGCTC
AGCGCGGAAC AGATCGCGGT CAGAGTCGGT GCATCACGGC ATCGGATGGA GCATCCAGGC
TTGGCCGACT GGGAGGTCGC TCTGGAGCTC GTCAACTCGC TGCAGGTCGG CCTTCTCGAA
GGCGGCGAGC TCTACGATGT CCCAGCCATC CGGAAGGACG GCACGCTGTA CGTCACCACA
GAGGCATGCA ACGTCACGAG GCTGGTCAGC GACTACAGCG TGGACGATCG TTACGACGAA
GACCTCGAAA ACGACGATGA AGAGACCATC CGGACCTTCA TCGCCGTCGG CAGTTCCTCG
TCACCGGATC ATGTGGTCGA AGCCTTGCTT CCGCGCGCAC TGCGCTACGA AGCACAGGCC
AAACTGGCAG GTGCCAGCGT GAGGCTCGCC TTCGATGCGG AAGGCAAGTT GGCATCAGTC
TCCACCTCCT AG
|
|---|
| Protein sequence | MTTIRLQTNQ HRLIANLRHA FNQRSMLGEL LQNARRAQAS DIRIYVTDDC IAVHDNGSGI
EDLQSLIHIA ESGWKAVIRE RENAFGMGAL ATLYFAERLM VRSRGQTFSA RTADILAGNP
IEVLPADGTW QGTQIQLDGV RSPDRHVFLP DWVRSEMRRL CEAFPVRVYV NDVEVPRPLA
KPDIRWRETS MGKVLIDLHG ATNQWRCFLQ GLPIQVGSSY APKQIVLLPD DMVAKLPDRQ
HLLNETSDIP RIQAAVNQAY RQALMDAKSE LAGHEFAEWY ADACVISSNA DLLNDVPFVP
RAWFRNWKDR PAGVCRYWEH YGDDGVTSAD AMSEAGVWRI EDDDGDVLLA EVFLQAADAY
LLEQINLDAG HWLLRLARPL SAEQIAVRVG ASRHRMEHPG LADWEVALEL VNSLQVGLLE
GGELYDVPAI RKDGTLYVTT EACNVTRLVS DYSVDDRYDE DLENDDEETI RTFIAVGSSS
SPDHVVEALL PRALRYEAQA KLAGASVRLA FDAEGKLASV STS
|
|---|
| |