| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0529 |
|---|
| Symbol | |
|---|
| ID | 4668876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 573364 |
|---|
| End bp | 573972 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639821734 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_968908 |
|---|
| Protein GI | 120609230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA CAGTGATTCC TCAGCGCTGC ACCACGGTCC TTCGATGGGC GATCGCACTG
GGCACGGCCG CATGCAGCGC CGTGCCCGCC CTCGCCCAGG AGCTTCCCCC GCCCGCCTAC
CAGATCGCCG CGGCGCAATC GGGCGTGCCC TCGTCCGTGC TGTACGCGGT CGCGCTGCAG
GAGAGCGGAA CCCGGCTGCG CGGCCGGCTG GTTCCCTGGC CGTGGACGCT CAACGTCGCC
GGCACGCCGC AGCGGCACGC CACGCGCGCT GACGCCTGCC TTGCGCTGCG CAGCGCACTG
CGGGACACCC CCGCCGAACG CATCGACGTC GGGCTCGGCC AGGTCAATGC GGGCTACCAC
GCGCACCGCG TGCAGCGACC CTGCGCGCTG CTGGACCCCT ACCGCAACCT CGGTATCGCC
GCAGAAATCC TGCATGAGCA GTACCGGCCC GGCGAAGACT GGCTGGCCGC GGTGGGCCGC
TACCACCGCC CCGCAGGCGG CCCGCCCGCA GCGCGCTACC GCGGCGCCGT GCAGCGCCAC
CTCGTGCGCT TGCTGGGCAA CCCGCAGGCG ATGGCCTCAC TGCATCCGCG TCGAGAGACC
ACCCCATGA
|
|---|
| Protein sequence | MAATVIPQRC TTVLRWAIAL GTAACSAVPA LAQELPPPAY QIAAAQSGVP SSVLYAVALQ
ESGTRLRGRL VPWPWTLNVA GTPQRHATRA DACLALRSAL RDTPAERIDV GLGQVNAGYH
AHRVQRPCAL LDPYRNLGIA AEILHEQYRP GEDWLAAVGR YHRPAGGPPA ARYRGAVQRH
LVRLLGNPQA MASLHPRRET TP
|
|---|
| |