| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0516 |
|---|
| Symbol | |
|---|
| ID | 4665364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 558828 |
|---|
| End bp | 559622 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639821722 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968896 |
|---|
| Protein GI | 120609218 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACC GCATCACCTC GCCGCGCGCC TTCGACTCGA CCGTTCTTCC CCCGCATGTG
GCGGAAGCGG TGTGGCTCGG TGCGGACGTC GGGCAATCCC TTGGGCGCAC AGTGCCTTCC
GGCTTCGATG CCCTCGATGC GCAGCTTCCT GGAGGAGGCT GGCCTACCCA TACGCTGACC
GAGCTGCTCA TGCCGCAGCC TGCGCTTTGC GAATGGCGGT TGCTGGGTCC TGCCGTGCCG
GCGATGTTGG CATCGGACGG GTGCATCTAC CTCGTGGCGC CGCCCAAGCA GCCCCATACG
GTTGGCCTCG CGCAACTGGG CCTGCCGCCT GATCGCGTCG TGTGGATCCA CGCCAGCGCG
CCCGCGGACC GGCTGTGGGT GACGGAGCAG TTGCTCAAGT CCAACCCTGC GGGCGCGGTG
CTGTCCTGGC TGCCACAGGC GCGGCCGGAG CAGATCCGCC GGCTGCAGGT CCACGCGCAG
TCCTGCGACG CCGCAATGTT CCTGCTGCGG CCGACGGCCG CGCTGTCCGG CGCGTCTCCG
GCACCGCTGC GTGTTGCTGC GGCCCTGGGC GGCGGCTGGC AGCTGGAGGT ACGCATTCCG
AAGCGCCGCG GAGCCCCCCT GGACAATGTC CTGCACCTGG AGGCCATCCC GGCGAGCCTG
GCGCCCATGC TGCCTCCGCG ACTCAGGACC ACCCCGGCCC CGTCGCCCCA ACCCCGCCGC
AAGGAGCCCG CCGATGTCCC CGCATTGGGC CGCGCTGCTT CCCCTTCCGC CCTCGGACTG
CCCGCATCCC ATTGA
|
|---|
| Protein sequence | MSHRITSPRA FDSTVLPPHV AEAVWLGADV GQSLGRTVPS GFDALDAQLP GGGWPTHTLT
ELLMPQPALC EWRLLGPAVP AMLASDGCIY LVAPPKQPHT VGLAQLGLPP DRVVWIHASA
PADRLWVTEQ LLKSNPAGAV LSWLPQARPE QIRRLQVHAQ SCDAAMFLLR PTAALSGASP
APLRVAAALG GGWQLEVRIP KRRGAPLDNV LHLEAIPASL APMLPPRLRT TPAPSPQPRR
KEPADVPALG RAASPSALGL PASH
|
|---|
| |