Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0485 |
Symbol | |
ID | 4667969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 524913 |
End bp | 525860 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821692 |
Product | integrase catalytic subunit |
Protein accession | YP_968866 |
Protein GI | 120609188 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGTC ATAAGCATGC GCGATTGACC CGCGCAGGTC GAGCCCTTCT GGTCGACAGA GTGCTCCAGC AGAACTGGAC GATGCGCCAA GCCAGCGAAG CCGCAGGCGT GAGCCTGCGC ACCGGCTACA AGTGGATGGC CCGCTTTCGC AACGAAGGCC CCGATGGCTT GCTCGACCGC AGCTCCCGCC CGCACCGCAG CCCCCAGGCC TGCCCACCCG AGCAGGTCCA GCTGTTCGAA CAGCAGCGCC GCCAGCGCTT GCCCCTTTGG CGCATCGCCC GTGAGACCGG CCGCAGTCTG GCGACCGTAG CGCGCCACAT GGACCGCATC GGCCTGAGCC GGCTCGCATC GCTGGAGCCA CCGCAGCCCG TGCGTCGCTA CGAGCGCGCC AGCCCGGGCG AACTGCTGCA CATCGACACC AAGCGGCTCG GCCGCATCCA CGGCGTGGGC CACCGCATCA CCGGCGACCG AACCCAGAAC CGCAACCGTG GCATCGGTTG GGATGCGGTG CATCTGGCCA TCGACGACCA CTCCCGCGTG TCCTTCGCCC AGGTCCTGGC CGACGAGACA GCGCTGAGTT GCGTGCAGTT CCTGCGAGAC GCGGTGGCCT ACTACGCCAA CATCGGCGTA CGCATCGAGC GCGTCATGAC CGACAACGGC TCTGGCTACA AAAACGCCTT CCGCGCGGCC TGCGAGGAAT TGGGCATCCG CCACATCCGC ACGCGGCCCT ATACGCCCAA GACCAACGGC AAGGCCGAGC GATTCGTACA GACCAGCCTG CGGGAGTGGG CCTATGCCAG ACCCTACGAA AGCTCAGCCC AACGCACGGC TGCCCTGCAG CCCTTCATTG ACGGCTACAA CTGGTGCCGG CCACACTCCG CGCTCGGCCA TCAGCCTCCC ATCACACGCA TTCCGGGTGT GAACAACCTC GTGAGACTCA ACAGCTAG
|
Protein sequence | MNSHKHARLT RAGRALLVDR VLQQNWTMRQ ASEAAGVSLR TGYKWMARFR NEGPDGLLDR SSRPHRSPQA CPPEQVQLFE QQRRQRLPLW RIARETGRSL ATVARHMDRI GLSRLASLEP PQPVRRYERA SPGELLHIDT KRLGRIHGVG HRITGDRTQN RNRGIGWDAV HLAIDDHSRV SFAQVLADET ALSCVQFLRD AVAYYANIGV RIERVMTDNG SGYKNAFRAA CEELGIRHIR TRPYTPKTNG KAERFVQTSL REWAYARPYE SSAQRTAALQ PFIDGYNWCR PHSALGHQPP ITRIPGVNNL VRLNS
|
| |