Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0481 |
Symbol | |
ID | 4667944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 517877 |
End bp | 520402 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821688 |
Product | Rhs element Vgr protein |
Protein accession | YP_968862 |
Protein GI | 120609184 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCC GCGTCACCAT ACAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG CAGGGGCGAG AAGAACTGAG CCAGGTTTTC AGCCTCGACA TCGACCTGCT GAGCGAGGAC AAAAGCATCG ACCCGAAGGC GCTGCTGGGC AAGAGCGCGA CGGTGGTGGT GGAGACCGAA GGCGGTGGCC GGCGCTACCT CGACGGGATC GTGACGCGCT TCGGCATGCA GGGGCAGGAC CACCGCTTCT ACGCCTACCG ACTGCGGCTG CAGCCTTGGG TTTGGCTGGC CTCGCGCAAG AGCGATTTCC GGATATTCCA GAACAAGAGC GTGCCGCAGA TCATCGAAGA GGTGCTGGGC GCGTACGGAT ATCCGATGGA AAAGAAACTC AGCCGCAGCT ACCGCACATG GGAATACTGC GTGCAATATG ACGAGAGCGA CCTGCAGTTC GTCTCGCGGC TGATGGAGCA CGAGGGCATC TATTACTACC ACCAGCATGC GCAGGGCCAG CACACGCTGA CGCTGGCCGA CGACATCGTG GCCTCGCACC AGCCACTGCC CGGGGCGGCC ACGATTCCGT TCTATCCGCC CGAGAAATCG GCGGTGGCCG ACCGCGAGAA CATCCACGCC TGGGAGCTGC ACGAGGAGAT CCACTCGGGC CGCTTCTACA ACGACGACTA CGACTTCAAG AAGCCCAAGG CGGACCTGGC GAACATGCGG CAGATGCCGC CGGGGCACAG CCACGATGCG TACGAGACGT ACGAGTGGCC CGGGGGCTAC ACGGAGTTCG GCGACGGCGA GGCCTATGCA CGGGTGCGGC TGCAGGAGAA CCTGAGCGGG CGCAGCACGG TGCGCGGCGA GTCGCGCCAC CGGTCCCTGG CCACGGGCTA CCTCTTCACG CTGGAGAACT ACCCGCGCGC AGACCAGAAC CAGCAGTACC TGATCACCGG CCTGCAGTAC CACTTCAAGG AGAACCCGCG GGTGAGCGCG GCGAACCCTG GGCAGAAGGG CACCGTGCAG GAAGAGGGCT CGTTCCAGCG CTTCACGCTG CAGGCGCAGC CCACGAGCCT GCCGTACACG CCGGCACGGG TGACGCCCAA GCCGAAGACC ACGGGGCCGC AGACCGCGGT GGTGGTGGGC CCGCCGGGCG AGGAGATCTG GCCGGACCAG TACGGGCGGG TGAAGGTGCA GTTCCACTGG GACCGGCAGG GCAGGTTCGA CGAGCAGTCC AGCTGCTGGA TCCGTGTGTC GCAGGGCTGG GCAGGGCAGA ACTACGGCAG CATCTACCTG CCGCGCATCG GGCAGGAAGT CATCGTGGAC TTCTTGTCCG GAGACCCGGA CCAGCCGATC ATCACGGGGC GGGTGTACAA CGCGGACCAG ATGCCGCCGT GGAAGCTGCC GGAGCACAAG ACGCAGTCGG GCACGCTCAC GCGCTGGAGC AAGGGTGGGG GCGGGGCGAG CATGCTGCGC TTCGAGGACC AGAAGGGGAT AGAGCACCTG GAGCTGTCGA ACACGTACGG CAACACGTAC CTGAACATGG GGTACCTGAT GCACCAGGGC ACGGGGTCGC AGCGGGGGTA TGGCTTCGAG CTGCGCACGG ACCTGTGGGG CTCGATCCGC GCGGACAAGG GCCTGCTCAT CACCACCTAT CCGCAGGACT TCACGTCCAT GGCGGCCAAC TTCAACCCGG ACGGCTTCGA CCAGCTGGGC GCGGGCCTGG CCGGCACGGC ATCGCTCATG CAGCAGGCCA GCCAGGCGGC GCAGACGCTG GACGCGAACC TCGGCGCACT CAACTCGCTC AAGACCTCGC ACATGATGGA ACTGGGCGCG GGCATCGCGG CCATGACCGG CGCGCAGGCG ACATCGGCAT CGCTGTCCAA GGCCGCGGCG GCGCTCTCGG CCTTCCAGGG TGGTGGCGGC GGTGCGCCGG AAGCGGCCCT GCCGTCCGAC ACCGATCCGG CCATGCCGCA GTCGCAGGCG CTGCGCGAAC TCTCGCGCGA CATCACGCAG CCCATCGTCT CCATCGTGAG CCCGCAGGGC CACACGATGG TCAGCCCCAA GCCGATCGTC ATCAGCTCGG GCCAGAGCGC GTCGATGCAC GCCACGCAGC ACATCACCGT CTCCAGCGGC GCGCAGCTCA CGCAGCTCGC CAAGGCCGGC ATGCTGACGC ACGTCTCCGA AGGCGGGCAG CGCACCACGG TGGGCGCGGG CGACATCGCC ACCGACGCGC AGACGGGCAA CCTCAACCTC ACCGCCCAGC AGAACGCGAC CCTGGCCTCG CGCACCGACA CCGCCACCGT CGTGGGCCAG CAGAACGTCA ACCTGCAGGC CACCGAGGAC TCGGTGCTCG TCAAGGCCGG CCAGCACATC CGCCTGCAGG CGGGCGCGAC GATCACGCTC ACCGCGGGCG AAGGTGCTTC CATCACCCTC ACGAGCGACG GCAAGGTGGA GATCCGCGGC AAGAACGGGC TCATCGAGCT CAAGGACGTG CTCACCGTGC TCGGCAAGCC CGTCAACATC AACTGA
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Protein sequence | MTRRVTIQTP LGEQLQFRQL QGREELSQVF SLDIDLLSED KSIDPKALLG KSATVVVETE GGGRRYLDGI VTRFGMQGQD HRFYAYRLRL QPWVWLASRK SDFRIFQNKS VPQIIEEVLG AYGYPMEKKL SRSYRTWEYC VQYDESDLQF VSRLMEHEGI YYYHQHAQGQ HTLTLADDIV ASHQPLPGAA TIPFYPPEKS AVADRENIHA WELHEEIHSG RFYNDDYDFK KPKADLANMR QMPPGHSHDA YETYEWPGGY TEFGDGEAYA RVRLQENLSG RSTVRGESRH RSLATGYLFT LENYPRADQN QQYLITGLQY HFKENPRVSA ANPGQKGTVQ EEGSFQRFTL QAQPTSLPYT PARVTPKPKT TGPQTAVVVG PPGEEIWPDQ YGRVKVQFHW DRQGRFDEQS SCWIRVSQGW AGQNYGSIYL PRIGQEVIVD FLSGDPDQPI ITGRVYNADQ MPPWKLPEHK TQSGTLTRWS KGGGGASMLR FEDQKGIEHL ELSNTYGNTY LNMGYLMHQG TGSQRGYGFE LRTDLWGSIR ADKGLLITTY PQDFTSMAAN FNPDGFDQLG AGLAGTASLM QQASQAAQTL DANLGALNSL KTSHMMELGA GIAAMTGAQA TSASLSKAAA ALSAFQGGGG GAPEAALPSD TDPAMPQSQA LRELSRDITQ PIVSIVSPQG HTMVSPKPIV ISSGQSASMH ATQHITVSSG AQLTQLAKAG MLTHVSEGGQ RTTVGAGDIA TDAQTGNLNL TAQQNATLAS RTDTATVVGQ QNVNLQATED SVLVKAGQHI RLQAGATITL TAGEGASITL TSDGKVEIRG KNGLIELKDV LTVLGKPVNI N
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