| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0466 |
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| Symbol | |
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| ID | 4667789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 504260 |
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| End bp | 505123 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639821673 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_968847 |
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| Protein GI | 120609169 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATG ACACGCCGTA TCCGGCCCGG GGCTTCTCGC CGCTGCGCCG GTGGCTCGCT
CCCCTCGTCC TGCTGCTGGC GCTCGTCGGC TGCAAGGACG ACCTCTATAC CAAGCAGACC
GAGGCAGACG CCAACGACAT GGTGGCAGCC CTGCTCGAAA GCGGCATCGA CGCGGGCAAG
GCGACCTCCG ACGCCGGCAA GACCTGGAAC GTGCAGGTGG AAAAGAGCGA CGTGGTGCGC
TCGCTCGCCG TGCTGCGCTC CTACGGGCTG CCGCGCGAGC GCCATGCCAC CCTGGGCGAG
ATGTTCAAGA AGGAAGGCCT GATCTCCACC CCGACGGAAG AGCGGGTGCG CTTCATCTAT
GGCGTCGCCC AGCAGCTGGA AGCCACGCTG TCGCAGATCG ACGGCGTGGT CACCGCGCGG
GTGCAGATCG TGCTGCCCAA CAACGACCCG CTCGCCTCCA CCGTCAAGCC CGCGAGCGCC
TCGGTGTTCA TCAAGTACCG CGAGAGCGCG AACATCGCCG GACTGACGGC GGGCATCAAG
AACATGGTGG CGCGCAGCGT CGAAGGCCTG ACGTACGAGA ACGTCACCGT CACGCTCGTG
CCGGGCATGC CCATCGGCCC CGCGCCGGAG AAGGAGGCCT CGCGCGCCGG CCTCTGGGCC
GCGCTGGCAG CCGCCGTGCT GCTGGTGCTG GGCGGCGCGG CGGGATGGAT CGCCTGGAAG
CGGCCGGCCT GGCTGCCCGC CGGCCTGCGC CGCAAGCCGG AAGCCGCCGG CGGCGAACTC
GCCGCGGACG CATCCGCCGC ATCCCCCGCT TCCGCGGCAC CCCTGCCGTC GGCCCCCGCC
ATGGCCAAGG GACTCGCGGG ATGA
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| Protein sequence | MTHDTPYPAR GFSPLRRWLA PLVLLLALVG CKDDLYTKQT EADANDMVAA LLESGIDAGK
ATSDAGKTWN VQVEKSDVVR SLAVLRSYGL PRERHATLGE MFKKEGLIST PTEERVRFIY
GVAQQLEATL SQIDGVVTAR VQIVLPNNDP LASTVKPASA SVFIKYRESA NIAGLTAGIK
NMVARSVEGL TYENVTVTLV PGMPIGPAPE KEASRAGLWA ALAAAVLLVL GGAAGWIAWK
RPAWLPAGLR RKPEAAGGEL AADASAASPA SAAPLPSAPA MAKGLAG
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