| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0464 |
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| Symbol | |
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| ID | 4668676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 502801 |
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| End bp | 503634 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639821671 |
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| Product | HrpE/YscL family type III secretion apparatus protein |
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| Protein accession | YP_968845 |
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| Protein GI | 120609167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCT GGTCTTCTCC CGGAGGCGCC GGCCTGCATT CGCCGGCCGG CATCCTCCGG
GCCGCTGAAT TCGAAACCGC CACCACGGCC GTGGCCGTGC TGGAAGGGGC ACGCACCGAG
GGCGACCACC TCCTCGCCCA GGCAAGGCAG GAGGCCGCCG ACCTGCTGGA GGCCGCGGCC
AGGCAGGCGC AGGCGCTGCG CGACCAGGCC GCGGCCGATG CCGCAGCCCT GGTCGATCAG
GCCCGTGCCG ATGCCCGGCT CCTCGCGGAG CAGGCCGTGG CCGACGCCTC CGAGGACGCC
GCCCGCCGCT GGCACGCGGA ATTCGCCGCG CTGCAGGCAT CGCACGATGC CGCCATGGCG
GGCATGGAAA AGCGCCTGGC GGCCGTTGTC GCGATGGCGG TGGAACGCAT GGTGCTGGCA
GAGCCGAGGC AGGCCCTGCT GCAACGCGCG GTCCTGACCC TGCGCGACAC CCTGGGCGAC
GCCCGCACCG CGCGCCTGCG TGTCCATCCT GACGATGCGG ACGCGGCACG CGCCGCGCTT
TCGGCCATCG GCAGCGACCC CGACGCCCCG CGCGTCCAGG TGGAGGCCGA TGCCGACCTA
CCGCCCGGCA GCAGCATTTT CGATGCCGAC ATCGGCCGCC TGGACACCAG CCTGCAGGTG
CAGCTGGCGG GCCTGCGCGG CGCGCTGGAG CGCGCCGTCC GCGTGGCCGC CGAGGAGCCG
GTCACCGTGG CCTATGCGAG CCGGCTGGGC GAGGACGATG GCCACGACAA CGACGAATAC
CAGGACGATG GACAGGACGA CGATCGCCTG CCCCGGGAGG ATGACGATGC ATGA
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| Protein sequence | MLIWSSPGGA GLHSPAGILR AAEFETATTA VAVLEGARTE GDHLLAQARQ EAADLLEAAA
RQAQALRDQA AADAAALVDQ ARADARLLAE QAVADASEDA ARRWHAEFAA LQASHDAAMA
GMEKRLAAVV AMAVERMVLA EPRQALLQRA VLTLRDTLGD ARTARLRVHP DDADAARAAL
SAIGSDPDAP RVQVEADADL PPGSSIFDAD IGRLDTSLQV QLAGLRGALE RAVRVAAEEP
VTVAYASRLG EDDGHDNDEY QDDGQDDDRL PREDDDA
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