Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0435 |
Symbol | |
ID | 4668365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 472034 |
End bp | 473293 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639821642 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_968816 |
Protein GI | 120609138 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.353489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGAAA TCATGGGTTT TTGGGCGCAA TGGCTGCGCC CATCGGCCGG GCTCCCGACG GTGCAGTGGT CCCTGCTGCT GGCCGTCGCG GCGGTTTCGG GCTATCTCTT CCAGCGCCAC ATCGGCCTGC CCAAGGTGGT GGGCTACACG CTCGTCGGCA CCATCGCCGG GCTGCTGGGC TTCAGCGGCG CCGTCTGGCC CCTGCAGGGC ATCAGCCTGT TCCTGCTGGA GCTGGGCATC GCCATCGTGC TGTTCGAGGC GGGCGGGCGC ATCCCGCTGC GGTGGTTCCG GCACAACCCG ATGGTGCTCG TGCAGAGCAT CATCGAATCG GCGCTGACCT ATTTCGCTGT GTACTACGCC ATGCTCTGGC TGGACGTGCC CCAGCGCGCC GCGGGCCCGC TGGCGCTGGT GGCCCTGGCG GCGTCGCCCG CCGTGCTCAC GCGCGTGGTG GCCGACACCC GCGCCGCCGG CCCGGTGACG GACCGCGCCA TCGTCCTGGC CACGCTCTCC ACCCTCTACG CGCTCACCCT GGGCAGCGCC ACCGCGGAAC TGATCAACCG TCCCGCCGCC CGCCTCATGG ACACCGTGTA CCCCGTCATG GTGGTGCTGG GCGTCTCGAT CATCGTCGGC GCGGTGCTCG CCCTGGTCCT GCGCATGGCC CTGCGCTTCA TGAGCCCGAC GAGCGAGAAC ACCGCCTTCC TGCTGCTCAC GCTGATCGCC GCCGGGACCG CCGTGGCCGC GCACATGGGA GGTTCCGCGC CGCTCGCCGC GCTGCTGGCC GGCATGCTGC TCAAGCAGCT CAACCCGCGC CCGTGGACCT GGCCCCGCCA GCTCGGCACC GCCGCCTCGC TGCTCACCAT GCTGATGTTC GTGCTGGTGT CCACCGTCGC CGCGCAGGCC GACTGGAGCG GCCCCGTGGC CGGCCTGGTG CTGGCCCTCA TCGTGGCGCG CCTGGTGGCC AAGGCCCTGG GCGTGGCCCT GGGCAACGTG GGCAGCGGCG CCAGCTGGCG CCAGGCCCTG TGGGTGGGCT GCGCGATGAC GCCGATGTCG TCGATCGCAC TGCTGATCGC CTCGCAGTTC GTGGTGGCCT CCGCTTCCAC CGGGCAGCTC ATCGCGCGCG TCGCCCTGCC CACCATCCTG CTCATGGAAG TGCTGGGCGC CGTGATCGCC ACGGTGGCCA TCTACCGCGC CGGAGAGAGT TCGAAACCCT GGGCGCCCCA GACACGCGCC GCCAACGCAG AGCGGGAGCA GCAGCCATGA
|
Protein sequence | MDEIMGFWAQ WLRPSAGLPT VQWSLLLAVA AVSGYLFQRH IGLPKVVGYT LVGTIAGLLG FSGAVWPLQG ISLFLLELGI AIVLFEAGGR IPLRWFRHNP MVLVQSIIES ALTYFAVYYA MLWLDVPQRA AGPLALVALA ASPAVLTRVV ADTRAAGPVT DRAIVLATLS TLYALTLGSA TAELINRPAA RLMDTVYPVM VVLGVSIIVG AVLALVLRMA LRFMSPTSEN TAFLLLTLIA AGTAVAAHMG GSAPLAALLA GMLLKQLNPR PWTWPRQLGT AASLLTMLMF VLVSTVAAQA DWSGPVAGLV LALIVARLVA KALGVALGNV GSGASWRQAL WVGCAMTPMS SIALLIASQF VVASASTGQL IARVALPTIL LMEVLGAVIA TVAIYRAGES SKPWAPQTRA ANAEREQQP
|
| |