Gene Aave_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0412 
Symbol 
ID4668244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp444871 
End bp445359 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID639821619 
Productputative transmembrane protein 
Protein accessionYP_968793 
Protein GI120609115 
COG category[S] Function unknown 
COG ID[COG3556] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC CCTTCGATGC AAAGGATCGC CGCGTGACCA CCGAAGCCCT GCTGGCCTAT 
GCCCATTTCC TGGCCATCCT GACCATGGCC GTCTTCCTCG CGAGCGAGGC CGCGCTCTGC
CGCAAGGAGT GGATGAATGC CGCCGTCGTG GAGCGCCTCG CGCGCGTGGA CCTGATCTAC
GGCCTCTCGG CCCTGGCCGT CCTGGCCACG GGCCTGGCCC GCGTGGCCTG GGGCATGAAG
GGCGCGGGGT GGTACTGGTC GCAACCGCTG CTGCACGCCA AGGTCACCCT GTTCGTGGTG
ATCGGCCTGC TGTCCATCGC CCCCACGATG CGCTTCCTGC GCTGGCGCAA GGCCCTGCGC
GCCACCGGCG CACTGCCCGA CGACGCCGCC ATCCGCAGCA CGCGCCGCCT CGTCATGATC
GAAGCCCACC TGCTGGCCGT GATCCCGCTC CTCGCCGTCT TCCTCGCCCG GGGCGTCGGC
GCCCGATAA
 
Protein sequence
MRHPFDAKDR RVTTEALLAY AHFLAILTMA VFLASEAALC RKEWMNAAVV ERLARVDLIY 
GLSALAVLAT GLARVAWGMK GAGWYWSQPL LHAKVTLFVV IGLLSIAPTM RFLRWRKALR
ATGALPDDAA IRSTRRLVMI EAHLLAVIPL LAVFLARGVG AR