| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0388 |
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| Symbol | |
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| ID | 4666238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 415599 |
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| End bp | 418757 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639821594 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_968769 |
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| Protein GI | 120609091 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTCATCGA ACGGCCCATC TTCGCATGGG TCATCACGAT CTTCATCATG
GTGATGGGGG GCCTCTCCAT CACCAAACTT CCGATTGCGC AGTACCCGGC CGTGGCGCCG
CCGACCATCC AGGTGTCGGT GGCCTACCCC GGCGCCAACG CCCAGACGCT GGAGGACAGC
GTGCTCGCCG TCATCGAGCG CGAGATGAAC GGCGCCACCG GCCTGGCCTA CGTCGAGACC
ACCAGCCAGG CCAACGGCAC GGGCTCGATC ACGCTGAGTT TCGAGCCCGG CACCAACGCC
GACCTGGCGC AGGTGGACGT GCAGAACCGC CTCTCGCGCG CCACGCCGCG GCTGCCCGCC
GCGGTGACGC AGCAGGGCGT ACGCGTGGAG CAGTCGCGCT CGAACTTCCT GATGTTCGCC
ATGCTCACGA CGGAAAACCC CGACGTGAGC ATCGAGGCGC TGAACGACTA CGCGGCGCGC
AACGTGGTGC CCGAGCTGCA GCGCGTGTCC GGCGTGGGCA CGCTCACGCA GTTCGGCGCC
GAGCGCGCGA TGCGCGTCTG GGTGGATCCG GCCAAGCTCA AGGGCTTCAA CCTGTCGCTC
GACCAAGTGA ACGCCGCGAT CCGCGCGCAG AACGTGCAGG TGTCGGCCGG CAACCTGGGC
GACCTGCCCG CCGAGCAGGG CCAGCCCGTC TCGGCCACCA TCGTCGTCAA GGGGCAACTC
AACAATGCCG AGCAGTTCGG CAACGTGGTG CTGCGCGCCA ACACCGACGG CTCCACCGTG
CGACTGAAGG ACGTGGCCCG CATCGAGCTG GGCTCGCAGA GCTACAGCAC CAGCGCGCGC
CTGAACGGCA AGCAGGCCGT GGGCCTGGGC GTGCAGCCCA CGCCGTCGGC GAACGCGCTG
GCCACCGCCA AGGCGGTGCG CGCCAAGCTG GAGGAACTCA AGAAGTTCTT CCCGCAGGGC
GTGAACTACG TGGTGCCCTA CGACACGTCG AAGTTCGTCT CGGTCTCGAT CGAGAAGGTG
GTGCACACGC TGATCGAGGC CGTGGTGCTG GTGTTCATCG TGATGTTCCT GTTCCTGCAG
AACTTCCGCT ACACCATCAT CCCGACCATC GTGGTGCCCG TGGCCCTGCT AGGCACGTTC
GGCGCACTGC TGGCGATGGG TTTCTCGATC AACGTGCTGA CCATGTTCGG CATGGTGCTG
GTGATCGGCA TCGTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGGATCATG
GCCGAGGAAG GCCTGCCGCC GCTGCAGGCC ACGCGCAAGG CCATGGGCCA GATCTCCGGC
GCCGTGATCG GCGTGACCGT GGTGCTGATC TCGGTGTTCG TGCCGCTGGC GTTCTTCGCC
GGCTCCACCG GCAACATCTA CCGCCAGTTC GCGGCGACGA TGGCCACTTC GATCGCGTTC
TCCGCCTTCC TTGCGCTGTC GCTCACGCCC GCGCTGTGCG CCACGCTGCT CAAGCCGATC
GACCCGGAGC ACCATGCCGA CAAGAAGGGC TTCTTCGGCT GGTTCAACCG CTCGTTCAAG
AGCACCACGC ACCGCTACGA GAGCTGGATG GGCAAGCTGC TGCGACGCGG CGGCCGCATG
ATGATCATCT ATGCCGTGCT GCTGGGCGCC GTGGCGCTGG TGTACACGCG CCTGCCGACC
TCGTTCCTGC CGAACGAAGA CCAGGGCTAC ATCATCACCA ACATCCAGTT GCCGGCCGGC
GCCGCGCAAT CGCGCACGAG CGACGTGCTG CACCAGGTCG AGGACTACAT GCTGAAGCAG
CCGGAGGTCG AGAACATCGT CACCGTGGCG GGCTTCTCCT TCTCCGGCCA GGGGCAGAAC
GCGGGCCTGG CGTTCGTCGT CCTCAAGGAC TGGAGCGAGC GCTCGGGCGC CGAGCATTCG
GCGGCGGCGA TCTCGGGCAG GGCCTTCATG GCGCTGTCCG GCATCCGCGA CGCCTTCATC
TTCGCGCTCA GCCCGCCGCC CATTCCCGAA CTGGGCACCG GAACCGGCTT CAGTTTCCGG
CTGCAGGACC GTGCCGCGCA GGGCCATGAC GCCCTGGTGG GCGCCCGCAA CCAGCTGCTG
GGCATGGCGT CGCAGAGCAA GGTGCTCTCG GGCGTGCGCC CCGACGGCAT GGAAGACGCG
CCGCAGATGC AGATCGACAT CGACCGCGAC AAGGCCAACG CGCTGGGCGT GGGCTTCGAC
AGCATCGGCA GCGCGCTGTC CACGGCGCTG GGCTCGGCCT ACATCAACGA CTTCCCGAAC
CAGGGCCGCC TGCAGCGCGT GGTGGTGCAG GCCGATGCCG CGGCGCGCAT GCGCCCCGAG
TCGGTGCTCG ACCTGCCGGT GCTGAACAAC CAGGGCCAGA CGGTGCCGAT GTCCGCCTTC
GCATCGACCC GCTGGATCAC GGGCGCCATG CAGACCGTGC GCTACAACGG CTACCCGGCG
ATGAAGATCG CCGGCGACGC CGCGCCGGGC TTCACCACGG GCGATGCGAT GGCCGAGATG
GAAAAGCTCG CCGGGCAGCT GCCTCCGGGC TTCGGCTTCG AGTGGACGGG CCAGTCGCGC
GAGGAAAAGC TCGCGGGCTC GCAGGCGACG GTGCTGTACG CGTTCTCGCT GCTGGCGGTG
TTCCTCTGCC TGGCGGCGCT GTACGAGAGC TGGTCGATCC CGTTCTCGGT GATGCTGGTG
GTGCCGCTCG GCGTGCTGGG CGTGCTGCTC GCGACGCTGA TGCGCGGCAT GTCCAACGAC
GTGTACTTCC AGATCGGGCT GGTGACCATC ATCGGGCTCT CGGCGAAGAA CGCCATCCTG
ATCGTGGAGT TCGCCAAGGA CCTGCAGGCC GAGGGCAGGA GCGTGCTGGA AGCGGCGCTG
GAAGCCGCCC ACCTGCGCTT CCGCCCCATC GTGATGACCT CGCTGGCCTT CACCCTGGGC
GTGGTGCCGC TGTTCATCGC ATCGGGCGCG AGCTCGGCGA GCCAGCGCGC CATCGGCACC
GGCGTGATCG GCGGGATGAT CACCGGCACC GTGCTGGCCG TGATCTTCGT GCCCGTGTTC
TTCGTGCTGG TGCGTTCCTT CTTCAAGGGC AGCAAGCGCC AGCACGACCA CGAGGCACGC
CAGGCGCATG CCCACCGGCA TGCCACGGAT GGGGAATAG
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| Protein sequence | MAKFFIERPI FAWVITIFIM VMGGLSITKL PIAQYPAVAP PTIQVSVAYP GANAQTLEDS
VLAVIEREMN GATGLAYVET TSQANGTGSI TLSFEPGTNA DLAQVDVQNR LSRATPRLPA
AVTQQGVRVE QSRSNFLMFA MLTTENPDVS IEALNDYAAR NVVPELQRVS GVGTLTQFGA
ERAMRVWVDP AKLKGFNLSL DQVNAAIRAQ NVQVSAGNLG DLPAEQGQPV SATIVVKGQL
NNAEQFGNVV LRANTDGSTV RLKDVARIEL GSQSYSTSAR LNGKQAVGLG VQPTPSANAL
ATAKAVRAKL EELKKFFPQG VNYVVPYDTS KFVSVSIEKV VHTLIEAVVL VFIVMFLFLQ
NFRYTIIPTI VVPVALLGTF GALLAMGFSI NVLTMFGMVL VIGIVVDDAI VVVENVERIM
AEEGLPPLQA TRKAMGQISG AVIGVTVVLI SVFVPLAFFA GSTGNIYRQF AATMATSIAF
SAFLALSLTP ALCATLLKPI DPEHHADKKG FFGWFNRSFK STTHRYESWM GKLLRRGGRM
MIIYAVLLGA VALVYTRLPT SFLPNEDQGY IITNIQLPAG AAQSRTSDVL HQVEDYMLKQ
PEVENIVTVA GFSFSGQGQN AGLAFVVLKD WSERSGAEHS AAAISGRAFM ALSGIRDAFI
FALSPPPIPE LGTGTGFSFR LQDRAAQGHD ALVGARNQLL GMASQSKVLS GVRPDGMEDA
PQMQIDIDRD KANALGVGFD SIGSALSTAL GSAYINDFPN QGRLQRVVVQ ADAAARMRPE
SVLDLPVLNN QGQTVPMSAF ASTRWITGAM QTVRYNGYPA MKIAGDAAPG FTTGDAMAEM
EKLAGQLPPG FGFEWTGQSR EEKLAGSQAT VLYAFSLLAV FLCLAALYES WSIPFSVMLV
VPLGVLGVLL ATLMRGMSND VYFQIGLVTI IGLSAKNAIL IVEFAKDLQA EGRSVLEAAL
EAAHLRFRPI VMTSLAFTLG VVPLFIASGA SSASQRAIGT GVIGGMITGT VLAVIFVPVF
FVLVRSFFKG SKRQHDHEAR QAHAHRHATD GE
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