Gene Aave_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0376 
Symbol 
ID4665871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp402691 
End bp405735 
Gene Length3045 bp 
Protein Length1014 aa 
Translation table11 
GC content74% 
IMG OID639821582 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_968757 
Protein GI120609079 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCT CCTCTTCCCG TGCTCCTCGC GCCCGCCCGC TGGCGGAAGC CTGGATCGCC 
GCGCGCGGCT GGCGCCCCTT CCCCTTCCAG CGCGAGGTCT GGCGTGCCCT TGCCCAGGGC
CGCAGCGGGC TGCTGCATGC AACCACCGGG GCCGGCAAGA CCTATGCGGT ATGGCTGGGC
GCGCTCCAGG CCTTCGGCAC CGCGGGCAAG GCGCGGGGCA AGGGCGAAGG TGGTACCTCC
GCCGACCTGG CCGATGCCCT GGAGGCCGCC GCGGGAAGGC CGGCGGACGG AAGGCGGCAC
AAGGCCCCGC CGCCGGAGCC GCTGACCGTG CTCTGGCTCA CGCCGATGCG GGCCCTGGCC
GCCGACACGC TGAAGGCCTT GCGAACCCCG CTCGATGAAC TCGCGGCGAC GCAGCCCGCG
CTCGCGCGCT GGACCAGTGG TGCCCGCACG GGCGACACGG GCAGTGCCGA ACGCGGCGCG
CAGTCGCGCC GGCTGCCCAC GGTGCTGGTG ACCACGCCGG AGAGCCTGTC GCTGTTGCTG
GCGCGGGCGG ACGCGCGAGA GCTGCTGTCC ACCGTGCGCC TCGTGGTGGC CGACGAGTGG
CACGAGCTGC TCGGCAACAA GCGCGGCGTG CAGGTGCAAT TGGCGCTGGC GCGGCTGGCC
GGCTGGAATC CGCGGGTGTG CGTCTGGGGC ATGTCGGCCA CGCTCGGCAA CCTGCCCGAG
GCGCGGGATG CGCTGCTGGC GCCCCTGGGC GCGGAGGGGG CAGGGGAGGG CGTGCTGGTG
CAGGGCCAGG TGGACAAGCG GCTCGTCGTC GATACGCTGC TGCCCGACCA TCCCGAGCGG
TTTTCCTGGG CCGGGCACCT GGGGCTGCGC ATGCTGCCCG CCGTGGTGCG CGAGCTGGAG
TCCACCACGA CCACGCTGGT GTTCGTGAAC GTGCGGTCGC AGGCGGAGCT CTGGTACAAG
GCCATCCTCG ACGCGCGGCC CGACTGGGCG GGCGAGCTGG CGATCCACCA CGGCTCGCTG
GACCGCGGCG TGCGCGAATG GGTGGAAGCG GGCCTCAAGG AAGGGCGCCT GCGCGCGGTG
GTGTGCACCA GCAGCCTGGA CCTGGGCGTG GATTTCCTGC CCGTGGAGCG CGTGCTGCAG
ATCGGTTCGG CCAAGGGCAT CGCGCGGCTG CTGCAGCGCG CCGGGCGCTC GGGCCATGCC
CCGGGGCGAC CGTCGCGCAT CACGCTGGTG CCCACGCACA GCCTGGAATT GGTCGAGGCG
GCCGCCGCGC GCGCGGCGGT GCAGGCCGGC GAGGTGGAGA TGCGCGCCAG TCCACGCAGG
CCGGTGGACG TGCTGGTGCA GCACCTCGTC ACCGTGGCGC TCGGGGGCGG TTTCGAGCCC
GAGGCGCTGT ATGCGGAGGT GCGCCGCACC GTGGCCTACC GCGACCTGCC GCGCGCGGTC
TGGCAGTGGT GCCTGGATTT CGTGCACCGC GGAGGGCCCT CGCTCGCGGC CTATCCCGAC
TACCAGCGCG TGGCGCCGGA CGAAGAGGGC ATCTGGCGCA TGCCGAGCGC CCGCCTGGCG
CGCCGCCACC GCGCCAATAT CGGCACCATC GTGAGCGACG CCAGCATGGC CGTGCAGGTG
CTGCACGGCG CGCGGCTCGG GACGATGGAA GAGAGCTTCC TGTCGCGCCT GTCGCCGGGC
GATTGCTTCG TTTTCGCGGG GCAGGTGCTG GAGATGGTGA AAATCGAGGA CATGACCGCC
TACGTGCGGC GCGCCGCGCG CGGACGGCCC ACGGTGCCGC GCTGGGCCGG ATCGCGCATG
CCGCTGTCCA CGGTGCTCGC GGATTTCGTG GTGCAGCAGC TCGCGCAGGC GGCCGCGGGG
CGTTATGGAT CGCCCGAGCT GCGCTGCGTG CGGCCGCTGC TGGAGGTGCA GCAGCGGTGG
TCCGCACTGC CGACGCCCGG TACGCTGCTC GCCGAAACCC TGCGCACCCG CGAGGGATGG
CACCTGTTCC TGTATCCGTT CGCGGGCCGC CACGCACACA TCGGCCTGGC CAGCCTTTTC
GCGTGGCGTG CCGCCCAGGG GGAGGCCGGC ACGTTTTCCA TCGCCGTGAA CGACTACGGG
CTGGAGCTGC TGTCGGCGAC CGAGCGCGAC TGGGCCGCCC TGCTGCCGGA GTTGCTGCGG
GTACATGCCG CGCCAGTGCC TGAGGGGGGG AGCGATACCG GCCCGCCGGG GCTGCCGGCC
GGCGAAGCCC TGGCCATCCG CAATACCGCG AACGCCGCGC GGGCCGCGGC CGCGGACTCG
TCCGGCGCCA GCGTGATCGG GACCGGCAGC GCCCCGCAGG ACGAGGCGCG CCACGCGCTG
CTGCACGAGG TGCTGGCCAG CCTCAACGCC ACCGAAATGG CCCGGCGCCG GTTCCGGGAA
ATCGCACGGG TCGCAGGGCT CATCTTTCAG AGCCATCCTG GCGAGCGCCG CAGCGCGCGG
CAGTTGCAGG CGTCGTCGCA GCTGTTCTTC GAGGTTTTCC GCAAGTACGA CGCCGGCAAC
ATGCTCCTGC GCCAGGCCGA CGAGGAAGTG CTGAGCCAGG AGCTGGACGT GGCGCAGCTG
CTGGCGGCGC TGCGCCGCAT GCAGGCGCAG GCCCTGGTGG TGCAGCCGCT GGCGCGGCCC
AGCCCGTTCG CTTTCCCGCT CATGGTGGAA CGCTTCCGGG AAAAGCTCAC CAACGAGGAC
CTGGCCGACC GCATCGCGCG CATGCTGGCG CAGCTGGACA CCGCCGCCGA CGAGGGAGGT
ACTGCTGCGC CCGGCCCGTC GGCGCAGGAT GTGGTGCCTC CGGACCCGCC CGCGCGGCCG
CAGCGCAGGC GCACCGCGGC GAAGAAGGCG GCCGGCAAGG AAGAGGACAC GGCGGGCGGG
GTTGCGCCTG CCGCCCAGAC CGCGATGCAG CAGGCCGCCG ACGCGGTGCG CCGCACGCTG
GACTTTTCAC TCACTTCCGC CGAGGACGGG GGCACCGGCG CGGCAGGGGA CGGACGCAGC
CGGCGCCGCG AGCGCAAGCC GTCGCGGCCC CTGCCGCGGC TGTGA
 
Protein sequence
MPSSSSRAPR ARPLAEAWIA ARGWRPFPFQ REVWRALAQG RSGLLHATTG AGKTYAVWLG 
ALQAFGTAGK ARGKGEGGTS ADLADALEAA AGRPADGRRH KAPPPEPLTV LWLTPMRALA
ADTLKALRTP LDELAATQPA LARWTSGART GDTGSAERGA QSRRLPTVLV TTPESLSLLL
ARADARELLS TVRLVVADEW HELLGNKRGV QVQLALARLA GWNPRVCVWG MSATLGNLPE
ARDALLAPLG AEGAGEGVLV QGQVDKRLVV DTLLPDHPER FSWAGHLGLR MLPAVVRELE
STTTTLVFVN VRSQAELWYK AILDARPDWA GELAIHHGSL DRGVREWVEA GLKEGRLRAV
VCTSSLDLGV DFLPVERVLQ IGSAKGIARL LQRAGRSGHA PGRPSRITLV PTHSLELVEA
AAARAAVQAG EVEMRASPRR PVDVLVQHLV TVALGGGFEP EALYAEVRRT VAYRDLPRAV
WQWCLDFVHR GGPSLAAYPD YQRVAPDEEG IWRMPSARLA RRHRANIGTI VSDASMAVQV
LHGARLGTME ESFLSRLSPG DCFVFAGQVL EMVKIEDMTA YVRRAARGRP TVPRWAGSRM
PLSTVLADFV VQQLAQAAAG RYGSPELRCV RPLLEVQQRW SALPTPGTLL AETLRTREGW
HLFLYPFAGR HAHIGLASLF AWRAAQGEAG TFSIAVNDYG LELLSATERD WAALLPELLR
VHAAPVPEGG SDTGPPGLPA GEALAIRNTA NAARAAAADS SGASVIGTGS APQDEARHAL
LHEVLASLNA TEMARRRFRE IARVAGLIFQ SHPGERRSAR QLQASSQLFF EVFRKYDAGN
MLLRQADEEV LSQELDVAQL LAALRRMQAQ ALVVQPLARP SPFAFPLMVE RFREKLTNED
LADRIARMLA QLDTAADEGG TAAPGPSAQD VVPPDPPARP QRRRTAAKKA AGKEEDTAGG
VAPAAQTAMQ QAADAVRRTL DFSLTSAEDG GTGAAGDGRS RRRERKPSRP LPRL