Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0376 |
Symbol | |
ID | 4665871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 402691 |
End bp | 405735 |
Gene Length | 3045 bp |
Protein Length | 1014 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639821582 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_968757 |
Protein GI | 120609079 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCT CCTCTTCCCG TGCTCCTCGC GCCCGCCCGC TGGCGGAAGC CTGGATCGCC GCGCGCGGCT GGCGCCCCTT CCCCTTCCAG CGCGAGGTCT GGCGTGCCCT TGCCCAGGGC CGCAGCGGGC TGCTGCATGC AACCACCGGG GCCGGCAAGA CCTATGCGGT ATGGCTGGGC GCGCTCCAGG CCTTCGGCAC CGCGGGCAAG GCGCGGGGCA AGGGCGAAGG TGGTACCTCC GCCGACCTGG CCGATGCCCT GGAGGCCGCC GCGGGAAGGC CGGCGGACGG AAGGCGGCAC AAGGCCCCGC CGCCGGAGCC GCTGACCGTG CTCTGGCTCA CGCCGATGCG GGCCCTGGCC GCCGACACGC TGAAGGCCTT GCGAACCCCG CTCGATGAAC TCGCGGCGAC GCAGCCCGCG CTCGCGCGCT GGACCAGTGG TGCCCGCACG GGCGACACGG GCAGTGCCGA ACGCGGCGCG CAGTCGCGCC GGCTGCCCAC GGTGCTGGTG ACCACGCCGG AGAGCCTGTC GCTGTTGCTG GCGCGGGCGG ACGCGCGAGA GCTGCTGTCC ACCGTGCGCC TCGTGGTGGC CGACGAGTGG CACGAGCTGC TCGGCAACAA GCGCGGCGTG CAGGTGCAAT TGGCGCTGGC GCGGCTGGCC GGCTGGAATC CGCGGGTGTG CGTCTGGGGC ATGTCGGCCA CGCTCGGCAA CCTGCCCGAG GCGCGGGATG CGCTGCTGGC GCCCCTGGGC GCGGAGGGGG CAGGGGAGGG CGTGCTGGTG CAGGGCCAGG TGGACAAGCG GCTCGTCGTC GATACGCTGC TGCCCGACCA TCCCGAGCGG TTTTCCTGGG CCGGGCACCT GGGGCTGCGC ATGCTGCCCG CCGTGGTGCG CGAGCTGGAG TCCACCACGA CCACGCTGGT GTTCGTGAAC GTGCGGTCGC AGGCGGAGCT CTGGTACAAG GCCATCCTCG ACGCGCGGCC CGACTGGGCG GGCGAGCTGG CGATCCACCA CGGCTCGCTG GACCGCGGCG TGCGCGAATG GGTGGAAGCG GGCCTCAAGG AAGGGCGCCT GCGCGCGGTG GTGTGCACCA GCAGCCTGGA CCTGGGCGTG GATTTCCTGC CCGTGGAGCG CGTGCTGCAG ATCGGTTCGG CCAAGGGCAT CGCGCGGCTG CTGCAGCGCG CCGGGCGCTC GGGCCATGCC CCGGGGCGAC CGTCGCGCAT CACGCTGGTG CCCACGCACA GCCTGGAATT GGTCGAGGCG GCCGCCGCGC GCGCGGCGGT GCAGGCCGGC GAGGTGGAGA TGCGCGCCAG TCCACGCAGG CCGGTGGACG TGCTGGTGCA GCACCTCGTC ACCGTGGCGC TCGGGGGCGG TTTCGAGCCC GAGGCGCTGT ATGCGGAGGT GCGCCGCACC GTGGCCTACC GCGACCTGCC GCGCGCGGTC TGGCAGTGGT GCCTGGATTT CGTGCACCGC GGAGGGCCCT CGCTCGCGGC CTATCCCGAC TACCAGCGCG TGGCGCCGGA CGAAGAGGGC ATCTGGCGCA TGCCGAGCGC CCGCCTGGCG CGCCGCCACC GCGCCAATAT CGGCACCATC GTGAGCGACG CCAGCATGGC CGTGCAGGTG CTGCACGGCG CGCGGCTCGG GACGATGGAA GAGAGCTTCC TGTCGCGCCT GTCGCCGGGC GATTGCTTCG TTTTCGCGGG GCAGGTGCTG GAGATGGTGA AAATCGAGGA CATGACCGCC TACGTGCGGC GCGCCGCGCG CGGACGGCCC ACGGTGCCGC GCTGGGCCGG ATCGCGCATG CCGCTGTCCA CGGTGCTCGC GGATTTCGTG GTGCAGCAGC TCGCGCAGGC GGCCGCGGGG CGTTATGGAT CGCCCGAGCT GCGCTGCGTG CGGCCGCTGC TGGAGGTGCA GCAGCGGTGG TCCGCACTGC CGACGCCCGG TACGCTGCTC GCCGAAACCC TGCGCACCCG CGAGGGATGG CACCTGTTCC TGTATCCGTT CGCGGGCCGC CACGCACACA TCGGCCTGGC CAGCCTTTTC GCGTGGCGTG CCGCCCAGGG GGAGGCCGGC ACGTTTTCCA TCGCCGTGAA CGACTACGGG CTGGAGCTGC TGTCGGCGAC CGAGCGCGAC TGGGCCGCCC TGCTGCCGGA GTTGCTGCGG GTACATGCCG CGCCAGTGCC TGAGGGGGGG AGCGATACCG GCCCGCCGGG GCTGCCGGCC GGCGAAGCCC TGGCCATCCG CAATACCGCG AACGCCGCGC GGGCCGCGGC CGCGGACTCG TCCGGCGCCA GCGTGATCGG GACCGGCAGC GCCCCGCAGG ACGAGGCGCG CCACGCGCTG CTGCACGAGG TGCTGGCCAG CCTCAACGCC ACCGAAATGG CCCGGCGCCG GTTCCGGGAA ATCGCACGGG TCGCAGGGCT CATCTTTCAG AGCCATCCTG GCGAGCGCCG CAGCGCGCGG CAGTTGCAGG CGTCGTCGCA GCTGTTCTTC GAGGTTTTCC GCAAGTACGA CGCCGGCAAC ATGCTCCTGC GCCAGGCCGA CGAGGAAGTG CTGAGCCAGG AGCTGGACGT GGCGCAGCTG CTGGCGGCGC TGCGCCGCAT GCAGGCGCAG GCCCTGGTGG TGCAGCCGCT GGCGCGGCCC AGCCCGTTCG CTTTCCCGCT CATGGTGGAA CGCTTCCGGG AAAAGCTCAC CAACGAGGAC CTGGCCGACC GCATCGCGCG CATGCTGGCG CAGCTGGACA CCGCCGCCGA CGAGGGAGGT ACTGCTGCGC CCGGCCCGTC GGCGCAGGAT GTGGTGCCTC CGGACCCGCC CGCGCGGCCG CAGCGCAGGC GCACCGCGGC GAAGAAGGCG GCCGGCAAGG AAGAGGACAC GGCGGGCGGG GTTGCGCCTG CCGCCCAGAC CGCGATGCAG CAGGCCGCCG ACGCGGTGCG CCGCACGCTG GACTTTTCAC TCACTTCCGC CGAGGACGGG GGCACCGGCG CGGCAGGGGA CGGACGCAGC CGGCGCCGCG AGCGCAAGCC GTCGCGGCCC CTGCCGCGGC TGTGA
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Protein sequence | MPSSSSRAPR ARPLAEAWIA ARGWRPFPFQ REVWRALAQG RSGLLHATTG AGKTYAVWLG ALQAFGTAGK ARGKGEGGTS ADLADALEAA AGRPADGRRH KAPPPEPLTV LWLTPMRALA ADTLKALRTP LDELAATQPA LARWTSGART GDTGSAERGA QSRRLPTVLV TTPESLSLLL ARADARELLS TVRLVVADEW HELLGNKRGV QVQLALARLA GWNPRVCVWG MSATLGNLPE ARDALLAPLG AEGAGEGVLV QGQVDKRLVV DTLLPDHPER FSWAGHLGLR MLPAVVRELE STTTTLVFVN VRSQAELWYK AILDARPDWA GELAIHHGSL DRGVREWVEA GLKEGRLRAV VCTSSLDLGV DFLPVERVLQ IGSAKGIARL LQRAGRSGHA PGRPSRITLV PTHSLELVEA AAARAAVQAG EVEMRASPRR PVDVLVQHLV TVALGGGFEP EALYAEVRRT VAYRDLPRAV WQWCLDFVHR GGPSLAAYPD YQRVAPDEEG IWRMPSARLA RRHRANIGTI VSDASMAVQV LHGARLGTME ESFLSRLSPG DCFVFAGQVL EMVKIEDMTA YVRRAARGRP TVPRWAGSRM PLSTVLADFV VQQLAQAAAG RYGSPELRCV RPLLEVQQRW SALPTPGTLL AETLRTREGW HLFLYPFAGR HAHIGLASLF AWRAAQGEAG TFSIAVNDYG LELLSATERD WAALLPELLR VHAAPVPEGG SDTGPPGLPA GEALAIRNTA NAARAAAADS SGASVIGTGS APQDEARHAL LHEVLASLNA TEMARRRFRE IARVAGLIFQ SHPGERRSAR QLQASSQLFF EVFRKYDAGN MLLRQADEEV LSQELDVAQL LAALRRMQAQ ALVVQPLARP SPFAFPLMVE RFREKLTNED LADRIARMLA QLDTAADEGG TAAPGPSAQD VVPPDPPARP QRRRTAAKKA AGKEEDTAGG VAPAAQTAMQ QAADAVRRTL DFSLTSAEDG GTGAAGDGRS RRRERKPSRP LPRL
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