| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0375 |
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| Symbol | |
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| ID | 4665885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 400893 |
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| End bp | 402593 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639821581 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_968756 |
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| Protein GI | 120609078 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACT TTGCCGCTCT CTACCGCGCG CTGGACGCGA GCACCTCCAG CCTCGCCAAG
CAGGCGGCGC TGCAGGCTTA CCTGCGCGCG GCGGCACCTG CGGATGCGGC CTGGGCGGTG
TACTTCCTGG CAGGCGGCAA GCCGCGCCAG CTGGTCCCGA CCAAGCTGCT GCGGCAGTTC
GCGCGCGAGG CGGCGGGCCT GCCGGAATGG CTGTTCGACG AAAGCTATGA AGCGGTCGGA
GACCTCGCGG AAACCATCGC ACTGCTGCTG CCGGCGCCCG CCGAGGCCCA TGCGCTGGGC
CTGGCCGAAT GGGTGGAGCA GCACCTGCTG CCGCTGCGCG GCATGGCGCC CGAAGCGCTG
GAGCCGATGT TGCGGGCGCA GTGGAACCGG CTGGCGCCCG AGGAGCGGCT CGTCTATTTC
AAGCTCATCA CGGGGGCCTT CCGCGTCGGT GTGTCGAAGC TGCAGGTCAC GCAGGCCCTG
GCGGCCGTGA GCGGCGTGGA TCCCAAGCGC GTGGCCCAGC GGCTCATGGG CTACACGCAC
ATCGGCGCAC GGCCCGGGCC GGCGGATTAC GAACGCCTCG TGGCGCCGCT CGCCGAGACC
GGCCAGGGCG CGGCGGACGA CGCGGCGCAG TCCGGCGAAA CCAGCGGCCA TCCCTATCCC
TTCTTCCTGG CGCACCCGCT GTCGCTGCCC GTGGACCAGT TCGCGGCCAC GCTCGGGCCG
CCCGGCGGCT GGATCGTGGA GTGGAAGTGG GACGGCATCC GCGCCCAACT GGTGCGGCGT
GCGGGTGCCA CCTGGGTCTG GTCGCGCGGC GAGGAGCTGG TCAGCGACCG CTTTCCCGAA
CTGCAGCGCC TGGGCCAGGA GGCCCTGCCG GACGGTACCG TGCTCGATGG CGAGATCGTC
GTCTGGCAGC ATGCGGAGGG CGATGCGCCG GCACGGGTGC GTCCGTTCGC GGACCTGCAG
AAACGCATCG GCCGCAAGAC GCTCGGCCCC AAGCTGCTGC GCGAGCTGCC CGTGGTGCTG
CTGGCCTACG ACCTGCTGGA AGAGGACGGG AAGGATCTGC GGGCGCTGCC GCAGCATGAA
CGCCGGGCGC GCCTCGATGC CCTGCTCGCC CGGGTGTCGC ATCCGGCGCT GGTCGCCAGC
CCCCTGCTGC ACGGCCATGA CTGGGACGAG CTGGCCGCCC GGCGGGCCCA TGCCCGATCC
CTGGGCGTCG AAGGCATGAT GCTCAAGGCC CGCGACGCGC AGTACGGCGT GGGCCGCACC
AAGGATGTGG GAACGTGGTG GAAATGGAAG ATCGACCCTC TGAGCGTGGA TGCGGTGCTC
ATCTATGCGC AGCGCGGCCA CGGGCGTCGC GCCAGCCTGT ACAGCGACTA CACCTTCGCC
GTCTGGGACG GGCCGCCCGG CGCGGAAGGC CGCTCTCTCG TGCCGTTCGC GAAAGCGTAT
TCGGGCCTGA CCGACGCCGA GATGGCGCGC GTGGACGCGG TCATCCGCCG CACCACGGTG
GAAACCTTCG GGCCGGTACG CAGCGTGAAG CCCACGCTGG TATTCGAGCT CGGCTTCGAG
GGCATCGCCC GCAGTGCGCG GCACAAGAGC GGCATCGCGG TGCGGTTTCC GCGGATGCTG
CGCTGGCGGG AGGACAAGCC GGTGGAGGAG GCGGATTCGC TGGAGACGCT GGAGGCGCTG
TTGCCGAGGT CGGATCCTTG A
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| Protein sequence | MKDFAALYRA LDASTSSLAK QAALQAYLRA AAPADAAWAV YFLAGGKPRQ LVPTKLLRQF
AREAAGLPEW LFDESYEAVG DLAETIALLL PAPAEAHALG LAEWVEQHLL PLRGMAPEAL
EPMLRAQWNR LAPEERLVYF KLITGAFRVG VSKLQVTQAL AAVSGVDPKR VAQRLMGYTH
IGARPGPADY ERLVAPLAET GQGAADDAAQ SGETSGHPYP FFLAHPLSLP VDQFAATLGP
PGGWIVEWKW DGIRAQLVRR AGATWVWSRG EELVSDRFPE LQRLGQEALP DGTVLDGEIV
VWQHAEGDAP ARVRPFADLQ KRIGRKTLGP KLLRELPVVL LAYDLLEEDG KDLRALPQHE
RRARLDALLA RVSHPALVAS PLLHGHDWDE LAARRAHARS LGVEGMMLKA RDAQYGVGRT
KDVGTWWKWK IDPLSVDAVL IYAQRGHGRR ASLYSDYTFA VWDGPPGAEG RSLVPFAKAY
SGLTDAEMAR VDAVIRRTTV ETFGPVRSVK PTLVFELGFE GIARSARHKS GIAVRFPRML
RWREDKPVEE ADSLETLEAL LPRSDP
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