| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0362 |
|---|
| Symbol | |
|---|
| ID | 4665325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 389995 |
|---|
| End bp | 390993 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639821568 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_968743 |
|---|
| Protein GI | 120609065 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.297178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTC CCGAAGTCGT GCGCGAAGCG CAATCCACCG TCGCCTACAA CCCGCTCGCC
AAGCAGAAGG CCGCCGCGAA GCTTTCCCGC ATCCCCATCA AGGTGGAGCA GGGCGAGGTG
CTGAAGAAAC CCGAGTGGAT CCGCGTCAAG GCCGGCTCGC CCACCACGCG TTTCTACGAG
ATCAAGGAGA TCCTGCGCGA GCACAAGCTG CACACGGTGT GCGAGGAGGC CTCGTGCCCC
AACATCGGCG AGTGCTTCGG CAAGGGCACG GCCACGTTCA TGATCATGGG CGACAAGTGC
ACGCGCCGCT GCCCGTTCTG CGACGTGGGC CACGGCCGGC CGGACCCGCT GGACAAGGAC
GAACCGCTGA ACCTCGCGCG CACCATCGCC GCGCTCAAGC TGAAGTACGT GGTGATCACC
AGCGTGGACC GCGACGACCT GCGCGACGGC GGCAGCGGCC ACTTCGTGGA GTGCATCCAG
AACATCCGCG CGCTCTCGCC CGCCACGCAG ATCGAGATCC TCGTGCCCGA CTTCCGCGGC
CGCGACGACC GCGCGCTGGA GATCCTCAAG GCCGCGCCGC CCGACGTGAT GAACCACAAC
CTGGAGACCG CGCCGCGCCT GTACAAGGAA GCGCGCCCGG GATCGGACTA CCAGTTCAGC
CTGAACCTGC TCAAGAAGTT CAAGGCGCTG CACCCCGGCG TGCCCACCAA GAGCGGCATC
ATGGTCGGCC TGGGCGAGAC CGATGAAGAG ATCCTGCAGG TGATGCGCGA CATGCGCGCG
CACGACATCG ACATGCTGAC CATCGGCCAG TACCTCGCGC CGTCCAACAG CCACCTGCCG
GTGCGCCGCT ACGTGCACCC CGATACCTTC AAGATGTATG AAGAGGAAGC CTACAAGATG
GGCTTCACCC ACGCCGCGGT GGGTGCGATG GTGCGTTCGA GCTACCACGC GGACCAGCAG
GCGCACGCGG CCGGCCTGCA GGCTGGCCCG CAGGGCTGA
|
|---|
| Protein sequence | MSTPEVVREA QSTVAYNPLA KQKAAAKLSR IPIKVEQGEV LKKPEWIRVK AGSPTTRFYE
IKEILREHKL HTVCEEASCP NIGECFGKGT ATFMIMGDKC TRRCPFCDVG HGRPDPLDKD
EPLNLARTIA ALKLKYVVIT SVDRDDLRDG GSGHFVECIQ NIRALSPATQ IEILVPDFRG
RDDRALEILK AAPPDVMNHN LETAPRLYKE ARPGSDYQFS LNLLKKFKAL HPGVPTKSGI
MVGLGETDEE ILQVMRDMRA HDIDMLTIGQ YLAPSNSHLP VRRYVHPDTF KMYEEEAYKM
GFTHAAVGAM VRSSYHADQQ AHAAGLQAGP QG
|
|---|
| |