Gene Aave_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0357 
Symbol 
ID4665892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp384901 
End bp385563 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content76% 
IMG OID639821563 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_968738 
Protein GI120609060 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.029609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCT CTTCCCTCGC ATCGCCGGCC ACCCCGGCCG TCCCTCCCAC CGCCGCAGGC 
ACGGACGACG GCGCCGCGCC CTCCCTGCGC GGACCGCTGC TGCGGCCGGC GCTGGCACTG
TTCGTTTGCC TGTCGGTGGC CACCGGCGTG CTCTATCCGC TGGCCGTCAC CGGCGTGGCG
CAGTCCGTGT TCCCGCAGCA GGCCGCGGGC AGCCTCGTCC GTGACAGCGC GGGGCACGCC
GTGGGCTCGC GCCTGATCGG GCAGAACTTC ACCGATCCCG CACACTTCTG GGGTCGCCCG
TCGGCCACGG CGCCCATGCC CTACCACGCG GGCGCTTCCG GCGGCTCGAA CCAGGGGCCG
GCGAACCCGG CCCTCGCCGA CGCGGTGAAG GCGCGCATCG AGGCCCTGCG GGCCGCCGAC
CCCGGCAACA CCGCGCCCGT TCCGGTGGAC CTCGTCACGG CCTCGGCCAG CGGGCTCGAT
CCCCACATCA GCGTGGCGGC GGCCCGCTAC CAGGCGGCCC GCGTGGCGCG CGCGCGCGGC
CTGCCGCAGG AACGCGTGGA CGCCCTGGTG CGATCGCACA CCGAGGCGCC GCTGCTGCCG
TGGCTGGGCG AGGCGGGCGT GAACGTGCTC ACGCTCAATC TGGCGCTCGA CGCGGTGCGC
TGA
 
Protein sequence
MASSSLASPA TPAVPPTAAG TDDGAAPSLR GPLLRPALAL FVCLSVATGV LYPLAVTGVA 
QSVFPQQAAG SLVRDSAGHA VGSRLIGQNF TDPAHFWGRP SATAPMPYHA GASGGSNQGP
ANPALADAVK ARIEALRAAD PGNTAPVPVD LVTASASGLD PHISVAAARY QAARVARARG
LPQERVDALV RSHTEAPLLP WLGEAGVNVL TLNLALDAVR