Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0352 |
Symbol | |
ID | 4668271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 378005 |
End bp | 378457 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639821558 |
Product | PTS system fructose subfamily IIA component |
Protein accession | YP_968733 |
Protein GI | 120609055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000331478 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCACGC GCATCCTCCT CATCGCCCAC GCCCCGCTGG CCCATGCGCT GCGCGCCTGC GCCCTGCACG TGTTCCCCGA TACCGCCGAC GACATCCTGG CGCTCGACGT GCATCCGAAT GCCCCTCCGG AGGACACGCT GGCTGCCGCG CGCATCCTGC TCGACGGGGC GGGCGGGGAC GCTCCCATCC TCGTGCTGAC GGACGTGTTC GGCGCGACCC CGTGCAACGT GGCCCAGCGC CTCGTGGACG GGGAGCGCTC GCGGCTGGTC ACCGGGGTGA ACCTGCCGAT GCTGTTGCGC GCGGTGAGCT ACCGCCGCGA GCCGCTCGAG GCGCTCGTCG CCCGCGCGAT CGCGGGCGGC ACCCAGGGGG TGATGCAGGT CGCTGTGGCC GCGCCACAGA ACCAGACACG ACGGTCCCAC CATGATCAAG ACGAATATCA CCATCAGCAA TAA
|
Protein sequence | MSTRILLIAH APLAHALRAC ALHVFPDTAD DILALDVHPN APPEDTLAAA RILLDGAGGD APILVLTDVF GATPCNVAQR LVDGERSRLV TGVNLPMLLR AVSYRREPLE ALVARAIAGG TQGVMQVAVA APQNQTRRSH HDQDEYHHQQ
|
| |