Gene Aave_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0352 
Symbol 
ID4668271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp378005 
End bp378457 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID639821558 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_968733 
Protein GI120609055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000331478 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCACGC GCATCCTCCT CATCGCCCAC GCCCCGCTGG CCCATGCGCT GCGCGCCTGC 
GCCCTGCACG TGTTCCCCGA TACCGCCGAC GACATCCTGG CGCTCGACGT GCATCCGAAT
GCCCCTCCGG AGGACACGCT GGCTGCCGCG CGCATCCTGC TCGACGGGGC GGGCGGGGAC
GCTCCCATCC TCGTGCTGAC GGACGTGTTC GGCGCGACCC CGTGCAACGT GGCCCAGCGC
CTCGTGGACG GGGAGCGCTC GCGGCTGGTC ACCGGGGTGA ACCTGCCGAT GCTGTTGCGC
GCGGTGAGCT ACCGCCGCGA GCCGCTCGAG GCGCTCGTCG CCCGCGCGAT CGCGGGCGGC
ACCCAGGGGG TGATGCAGGT CGCTGTGGCC GCGCCACAGA ACCAGACACG ACGGTCCCAC
CATGATCAAG ACGAATATCA CCATCAGCAA TAA
 
Protein sequence
MSTRILLIAH APLAHALRAC ALHVFPDTAD DILALDVHPN APPEDTLAAA RILLDGAGGD 
APILVLTDVF GATPCNVAQR LVDGERSRLV TGVNLPMLLR AVSYRREPLE ALVARAIAGG
TQGVMQVAVA APQNQTRRSH HDQDEYHHQQ