| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0338 |
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| Symbol | rplC |
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| ID | 4669013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 370479 |
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| End bp | 371153 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639821544 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_968719 |
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| Protein GI | 120609041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000274222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000311926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GCAACTCCCT CGGGTTGCTG GGCCGCAAGG TGGGCATGAT GCGTCTGTTC
ACCGATGACG GGGACGCAGT GCCCGTCACG GTGGTGGATG TGTCCAACAA CCGCGTGACC
CAGGTCAAAA CCCAAGAGAA CGATGGCTAC GTGGCCCTGC AGGTCACGTT CGGTTCGCGC
AAGGCATCTC GCGTGACCAA GCCCGAAGCC GGCCACCTTG CCAAGGCAGG TGTGGAAGCC
GGTGAAATCA TCCGTGAATT CCGCGTGACC GCAGAAACCG CTGGCAAGTA CGCCACCGGT
GCCGCAGTGC CCGTGGCGGA CGTGTTCTCC GTGGGCCAGA AAGTCGATGT GCAAGGCACC
TCGATCGGTA AGGGCTACGC CGGCACGATC AAGCGCCACA ACATGGCCTC GCAACGCGCG
TCGCACGGTA ACAGCCGCTC GCACAACGTG CCCGGCTCGA TCGGCATGGC GCAGGATCCC
GGCCGCGTGT TCCCCGGCAA GCGCATGACG GGCCACCTCG GCGACGCCAC CACCACCACG
CAGAACCTCG ACGTCATCCG CGTCGACGAG GCACGCCAGC TCCTCCTGAT CAAGGGCGCC
ATTCCGGGCT CGAAGGGTGG CTTCGTGACC GTGCGTCCCG CCGTCAAGGC CAAAGCTTCC
CAAGGAGCGA ACTAA
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| Protein sequence | MSLSNSLGLL GRKVGMMRLF TDDGDAVPVT VVDVSNNRVT QVKTQENDGY VALQVTFGSR
KASRVTKPEA GHLAKAGVEA GEIIREFRVT AETAGKYATG AAVPVADVFS VGQKVDVQGT
SIGKGYAGTI KRHNMASQRA SHGNSRSHNV PGSIGMAQDP GRVFPGKRMT GHLGDATTTT
QNLDVIRVDE ARQLLLIKGA IPGSKGGFVT VRPAVKAKAS QGAN
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