Gene Aave_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0334 
Symbol 
ID4669766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp365782 
End bp366255 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID639821540 
Product30S ribosomal protein S7 
Protein accessionYP_968715 
Protein GI120609037 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00798537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACGTC GTCGCGAAGT CCCCAAACGT GAAATCCTGC CGGACCCGAA GTTCGGCAAT 
GTCGAGCTGT CCAAATTCAT GAACGTGATC ATGGAAGGCG GCAAGAAGGC AGTTGCAGAG
CGCATCATCT ATGGCGCCCT GGAACTCATC CAGAAGAAGC ACCCCGACAA GGATCCCCTG
GAAGCGTTCA CCGTTGCCAT CAACAACGTG AAGCCCATGG TGGAAGTGAA GTCCCGCCGC
GTCGGTGGTG CCAACTACCA GGTGCCGGTC GAAGTGCGTC CCGTGCGTCG CCTGGCCCTG
TCGATGCGCT GGCTCAAGGA AGCCGCGCGC AAGCGCGGCG AGAAGTCCAT GGCCCAGCGC
CTGGCCAACG AGCTGCTGGA AGCCACGGAA GGCCGTGGCG GCGCGATGAA GCGCCGTGAC
GAAGTGCACC GCATGGCGGA AGCCAACAAG GCGTTCAGCC ACTTCCGCTT CTAA
 
Protein sequence
MPRRREVPKR EILPDPKFGN VELSKFMNVI MEGGKKAVAE RIIYGALELI QKKHPDKDPL 
EAFTVAINNV KPMVEVKSRR VGGANYQVPV EVRPVRRLAL SMRWLKEAAR KRGEKSMAQR
LANELLEATE GRGGAMKRRD EVHRMAEANK AFSHFRF