Gene Aave_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0331 
Symbol 
ID4668533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp363181 
End bp363822 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID639821537 
Productputative transmembrane protein 
Protein accessionYP_968712 
Protein GI120609034 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0186533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC AGACTGAACG CCTGACCTTC TCCGGCGCGG CCGGTGCCAT CGAGGCGCTG 
CGCGACCCGG CCGCCGCGGC CGCGGGCGAC GCCCCGCGCG GCGTGGCCGT GATCGCCCAT
CCCCATCCGC TCTTCGGCGG CACCATGGAC AACAAGGTCG TGCAGACCCT CGCCCGGGCC
TTCGTCGCCT GTGGATGGAC GGCCGTGCGC TTCAATTTCC GGGGCGTCGG CGGCAGTGCC
GGCGCCCACG ACGAAGGGCG CGGAGAGCTG GACGACCTGC TCGCGGTCAT CGACCAGGCG
GCGCCCGCCG GTGCGATCGC GCTGGCCGGG TTTTCCTTCG GTGCCTTCGT CACCAGCCAC
GCCCTGGAGC GGCTCTGGGG CGCGCGCGAC ATAGAACGCG CCGTGCTCGT GGGGACGGCC
GCCAGCCGCT TCACCGTCGC GCCCGTGCCG GCCGAGGCCC ATGGCCGCAC GCTGGTCGTC
CACGGCGAGC AGGACGACAC CGTGCCCCTG GCTGCCGTGA TGGACTGGGC GCGCCCGCAG
ACACTCCCTG TGACAGTCGT GCCCGGTGGC GGGCATTTCT TTCACGGACA ATTGCCGCTG
CTCAAGAGCC TGGTCATGCG GCACCTGACT TCCCAGGCCT GA
 
Protein sequence
MNAQTERLTF SGAAGAIEAL RDPAAAAAGD APRGVAVIAH PHPLFGGTMD NKVVQTLARA 
FVACGWTAVR FNFRGVGGSA GAHDEGRGEL DDLLAVIDQA APAGAIALAG FSFGAFVTSH
ALERLWGARD IERAVLVGTA ASRFTVAPVP AEAHGRTLVV HGEQDDTVPL AAVMDWARPQ
TLPVTVVPGG GHFFHGQLPL LKSLVMRHLT SQA