Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0331 |
Symbol | |
ID | 4668533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 363181 |
End bp | 363822 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639821537 |
Product | putative transmembrane protein |
Protein accession | YP_968712 |
Protein GI | 120609034 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0186533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGCCC AGACTGAACG CCTGACCTTC TCCGGCGCGG CCGGTGCCAT CGAGGCGCTG CGCGACCCGG CCGCCGCGGC CGCGGGCGAC GCCCCGCGCG GCGTGGCCGT GATCGCCCAT CCCCATCCGC TCTTCGGCGG CACCATGGAC AACAAGGTCG TGCAGACCCT CGCCCGGGCC TTCGTCGCCT GTGGATGGAC GGCCGTGCGC TTCAATTTCC GGGGCGTCGG CGGCAGTGCC GGCGCCCACG ACGAAGGGCG CGGAGAGCTG GACGACCTGC TCGCGGTCAT CGACCAGGCG GCGCCCGCCG GTGCGATCGC GCTGGCCGGG TTTTCCTTCG GTGCCTTCGT CACCAGCCAC GCCCTGGAGC GGCTCTGGGG CGCGCGCGAC ATAGAACGCG CCGTGCTCGT GGGGACGGCC GCCAGCCGCT TCACCGTCGC GCCCGTGCCG GCCGAGGCCC ATGGCCGCAC GCTGGTCGTC CACGGCGAGC AGGACGACAC CGTGCCCCTG GCTGCCGTGA TGGACTGGGC GCGCCCGCAG ACACTCCCTG TGACAGTCGT GCCCGGTGGC GGGCATTTCT TTCACGGACA ATTGCCGCTG CTCAAGAGCC TGGTCATGCG GCACCTGACT TCCCAGGCCT GA
|
Protein sequence | MNAQTERLTF SGAAGAIEAL RDPAAAAAGD APRGVAVIAH PHPLFGGTMD NKVVQTLARA FVACGWTAVR FNFRGVGGSA GAHDEGRGEL DDLLAVIDQA APAGAIALAG FSFGAFVTSH ALERLWGARD IERAVLVGTA ASRFTVAPVP AEAHGRTLVV HGEQDDTVPL AAVMDWARPQ TLPVTVVPGG GHFFHGQLPL LKSLVMRHLT SQA
|
| |