Gene Aave_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0328 
Symbol 
ID4669643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp361167 
End bp361595 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content68% 
IMG OID639821534 
Producthypothetical protein 
Protein accessionYP_968709 
Protein GI120609031 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.038975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGG TCAAAGCCTT CCATATCGTC TTCGTGGCCA GCTGGTTCGC GGGCCTGTTC 
TACCTGCCAC GCATCTTCGT GAACCTCGCC ATGGTGCCTC CGGATTCCAC CGCCGAGCGG
GAGCGCCTGC TGCTCATGGC CCGCAAGCTG CTGCGCTTCA CCACGCTGCT GGCGGTGCCC
GCGCTGACCC TGGGCCTGTG GCTCTACCTG GGCTACGGCA TCGGCCGCGG CCCCGGCAAC
GGCTGGATGC ACGCCAAGCT CGCCGTGGTG GTGCTGGCCG TGGGCTACCA CCATGCCTGC
GGCGTCCTGC TGCGCAAGTT CGCCGCCGGG CGCAACAGCC ACGGCCACCG CTGGTACCGC
TGGTTCAACG AGGTGCCCGT GCTGATGCTG GTGGCCGCGG TGGTACTGGT GGTCGTCAAG
CCGTTCTGA
 
Protein sequence
MLWVKAFHIV FVASWFAGLF YLPRIFVNLA MVPPDSTAER ERLLLMARKL LRFTTLLAVP 
ALTLGLWLYL GYGIGRGPGN GWMHAKLAVV VLAVGYHHAC GVLLRKFAAG RNSHGHRWYR
WFNEVPVLML VAAVVLVVVK PF