Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0322 |
Symbol | |
ID | 4669665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 354091 |
End bp | 355659 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639821528 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_968703 |
Protein GI | 120609025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.516199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTC CCACCCACAC ACCGCCCCTG GCGCCGCCGC CGCTCGAAGG CAGCGCGCGC ATGTGGGGCA CGCTGGCCCT CTCGGCGGCC ACATTCATGA ACGTGCTGGA CACGTCGATC GCCAACGTGT CGCTGCCCGC CATCGCGGGC GACCTGGGCG TGAGCCCCAC GCAGGGCACC TGGGTCATCA CCAGCTTCGC GGTGGCCAAC GCCATCGCGG TGCCGCTCAC CGGCTGGCTG TCGCAGCGCT TCGGGCAGGT GCGCCTGTTC GTGGCCAGCG TGACGCTCTT CGTCATCGCA TCGCTGCTGT GCGGGCTGGC GCCCAACATG GCCACGCTCA TCGCCTTCCG CGCACTGCAG GGTTTCGTGG CCGGGCCGAT GATCCCGCTG TCGCAGTCGC TGCTGCTTTC CAGCTACCCC AAGGCGCTGG CCGGGCTGGC CATGGCGATG TGGTCGATGA CCACGCTCAT CGCGCCGGTC ATGGGGCCGT TGCTGGGCGG CTGGATCACG GACAACATGA CCTGGCCGTG GATCTTCTAC ATCAACGTGC CGGTGGGCAT CGTGGCGGTG CTCGTCACCT GGGGCATATT CCACAAGCGC GAATCCGAGC GGCGCGCGCT GCCGATCGAC TCCGTCGGCC TGGCCCTGCT CGTCATCTGG GTGGCGGCGA TGCAGGTGAT GCTGGACATC GGCAAGGAGC ATGACTGGTT CGCTTCGCCC TGGGTCGTGG CCTGCTGTGT GGTGGCCGTG GTGGGCTTCA TCACCTTCAT GGTCTGGGAG CGCGGCGAGG AGCACCCCGT GGTGGACCTG TCGCTCTTCA AGATCCGGAA TTTCTGGGCG GGCGCGCTGG CCACCTCGGT GGGCTACGGG CTGTTCTTCG GCAACGTGGT GCTGCTGCCG CTCTGGCTGC AGCAGTACAT GGGCTACACG GCCACGCAGG CGGGCATGGT GATGGCGCCG GTGGGCCTGC TGGCGCTGGT GCTCTCCCCG GTGGTGGGCA AGAACATCGC CAAGGTGGAC CCGCGCCGTT TCGCGACCTT CGCCTTCCTC GTGTTCGCGC TGGTGCTGTG GATGCGCTCG CGGTTCAATA CGCAGGCGGA CCTGGCGACC ATCATGGTGC CCACCATCAT CCAGGGCATC GCCATGGCGT TCTTCTTCAT CCCGCTGGTG ACGCTCACGC TGTCGGAGAT CGCGCCGGCG CGCATTCCGT CGGCGTCCGG GCTGTCGAAC TTCATGCGCA TCACGGCCGG GGCCATCGGC ACGTCCGTGT CCACCACGCT GTGGGAGCGG CGTGCCACGC TGCACCATGC GCAGTTGACC GAGGGCCTGC AGCAGGGCGG GGTGGCCGTC ACGCAGACGC TGCAAGGGCT GCAGGCGGGC GGATTGACGG CGGAGCAGGC GCTCGCGCAG GTCGAGCGGC TGGTGAACCA GCAGGCCTTC ATGCTGGCGG CCAACGACAT CTTTTATGCG TCGGCCGTGC TGTTCCTGCT GCTGATTCCG CTGGTCTGGC TGGCCCACCC GGTACGTGCC AGTGCCGGCA GCGCGGACGC GGCGGCGGGT GCGCATTGA
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Protein sequence | MSSPTHTPPL APPPLEGSAR MWGTLALSAA TFMNVLDTSI ANVSLPAIAG DLGVSPTQGT WVITSFAVAN AIAVPLTGWL SQRFGQVRLF VASVTLFVIA SLLCGLAPNM ATLIAFRALQ GFVAGPMIPL SQSLLLSSYP KALAGLAMAM WSMTTLIAPV MGPLLGGWIT DNMTWPWIFY INVPVGIVAV LVTWGIFHKR ESERRALPID SVGLALLVIW VAAMQVMLDI GKEHDWFASP WVVACCVVAV VGFITFMVWE RGEEHPVVDL SLFKIRNFWA GALATSVGYG LFFGNVVLLP LWLQQYMGYT ATQAGMVMAP VGLLALVLSP VVGKNIAKVD PRRFATFAFL VFALVLWMRS RFNTQADLAT IMVPTIIQGI AMAFFFIPLV TLTLSEIAPA RIPSASGLSN FMRITAGAIG TSVSTTLWER RATLHHAQLT EGLQQGGVAV TQTLQGLQAG GLTAEQALAQ VERLVNQQAF MLAANDIFYA SAVLFLLLIP LVWLAHPVRA SAGSADAAAG AH
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