| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0311 |
|---|
| Symbol | |
|---|
| ID | 4666086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 345166 |
|---|
| End bp | 345789 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639821517 |
|---|
| Product | phosphoadenylylsulfate reductase (thioredoxin) |
|---|
| Protein accession | YP_968692 |
|---|
| Protein GI | 120609014 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA TCGACCTCGA CTGGATCAAC GCCGAACTCG GCCACAACGC GCAGGGCCTC
GTGGACTGGG CCATCGGCCT GGGCCAGCCC GCCATCGTCA CCACCAACTT CCGCCCGTTC
GAGGCCGTGA TCCTGCACAT GTGCACGCGC GCCCGGCCGG ACATCCCGGT CGTGTGGATG
GACAACGGCT ACAACACCGA GGCCACCTAC CGGTTCGCCG ACGAAGTGAC GCGCCAACTC
GGGCTCAACC TGCGCATCTA CCTGCCGCTG CGCTCGCGTG CCCACCGCGA GGCGGTGGAC
GGTCCCACGC CTGCGCTGGA CGACCCCCGC CACGCCGCGT TCACGCAGGA GGTCAAGCTC
GAGCCCTTCG CGCGGGCCCT GCGGGAGACG GCCCCCAAGG TCTGGTTCAC GGCCCTGCGC
GCCACCGATA CGGCCGTGCG TGCGCGGATG GATCCGGTGA GCCTCAACCC CGACGGCCTC
ATCAAGGTCG CGCCGCTGCT GCACTGGAGC TCCAAGGACC TGTACGAGTA CTGCCAGGCG
CAGGGCCTGC CCAACAATTT CGACTACGTG GATCCGACCA AAGGCGAAGA CAACCGGGAG
TGCGGCCTGC ATCTGGCCCA CTGA
|
|---|
| Protein sequence | MSSIDLDWIN AELGHNAQGL VDWAIGLGQP AIVTTNFRPF EAVILHMCTR ARPDIPVVWM
DNGYNTEATY RFADEVTRQL GLNLRIYLPL RSRAHREAVD GPTPALDDPR HAAFTQEVKL
EPFARALRET APKVWFTALR ATDTAVRARM DPVSLNPDGL IKVAPLLHWS SKDLYEYCQA
QGLPNNFDYV DPTKGEDNRE CGLHLAH
|
|---|
| |