Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0309 |
Symbol | |
ID | 4669371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 342630 |
End bp | 343292 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639821515 |
Product | putative lipoprotein |
Protein accession | YP_968690 |
Protein GI | 120609012 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACC ACGCAGTCAA CACCCGGGCC CGCGGACTCT GGACCGCCCT CGCGGCCGCC GCGCTCATGG CGGGCTGCTC CGCCCTGCCT GCGCCGCCGC CCCGGGCCGA CGTGTACGAC TTCGGTCCCG GCACGCTGGC GCAAGCGCCC GGCGAACGCG GCGCGCCGCT GCCGCCCATC GCGCTGCCGG AGGTCGCCGT CGCGGGGCCG GTCGAAGGCA GCACCGCCGT GCTGTACCGC CTGGCGTACG ACGATCCGCG CCACCTGCGT CCCTATGGCC AGGCACGCTG GAGCCAGCCG CCCGCACAAC TCGTGCAGCA GGCCCTGCGC GACCAACTCG GCCTGCGCCG CGCCGTGCTC ATGGGCGAGG AGGGCGCGGC GCAGCTCGTG GACACCGGCA AGCCGCCCGC GGTGCTGCGC GTGGAGATCG AGGAGTTCAG CCAGGTCTTC CAGGCGCCCA AGGCCAGCAC CGGCGTGCTG CGGCTGCGCG CCTCGCTCGC CGACTCCACC CAGGCCGGCG AGAAGCTCGT CGCCCAGCGC GTCTTCGTCA TCCAGCGCCC GGCTCCCACG CCGGACGCCC GCGGCGGTAC CCATGCGATG GCGGAAGCAG CTGCCCAGGC GGCGCGGGAC GTGGCGGCCT GGGTGGAGCA GGCGGGGCGG TAG
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Protein sequence | MAHHAVNTRA RGLWTALAAA ALMAGCSALP APPPRADVYD FGPGTLAQAP GERGAPLPPI ALPEVAVAGP VEGSTAVLYR LAYDDPRHLR PYGQARWSQP PAQLVQQALR DQLGLRRAVL MGEEGAAQLV DTGKPPAVLR VEIEEFSQVF QAPKASTGVL RLRASLADST QAGEKLVAQR VFVIQRPAPT PDARGGTHAM AEAAAQAARD VAAWVEQAGR
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