Gene Aave_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0309 
Symbol 
ID4669371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp342630 
End bp343292 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content76% 
IMG OID639821515 
Productputative lipoprotein 
Protein accessionYP_968690 
Protein GI120609012 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACC ACGCAGTCAA CACCCGGGCC CGCGGACTCT GGACCGCCCT CGCGGCCGCC 
GCGCTCATGG CGGGCTGCTC CGCCCTGCCT GCGCCGCCGC CCCGGGCCGA CGTGTACGAC
TTCGGTCCCG GCACGCTGGC GCAAGCGCCC GGCGAACGCG GCGCGCCGCT GCCGCCCATC
GCGCTGCCGG AGGTCGCCGT CGCGGGGCCG GTCGAAGGCA GCACCGCCGT GCTGTACCGC
CTGGCGTACG ACGATCCGCG CCACCTGCGT CCCTATGGCC AGGCACGCTG GAGCCAGCCG
CCCGCACAAC TCGTGCAGCA GGCCCTGCGC GACCAACTCG GCCTGCGCCG CGCCGTGCTC
ATGGGCGAGG AGGGCGCGGC GCAGCTCGTG GACACCGGCA AGCCGCCCGC GGTGCTGCGC
GTGGAGATCG AGGAGTTCAG CCAGGTCTTC CAGGCGCCCA AGGCCAGCAC CGGCGTGCTG
CGGCTGCGCG CCTCGCTCGC CGACTCCACC CAGGCCGGCG AGAAGCTCGT CGCCCAGCGC
GTCTTCGTCA TCCAGCGCCC GGCTCCCACG CCGGACGCCC GCGGCGGTAC CCATGCGATG
GCGGAAGCAG CTGCCCAGGC GGCGCGGGAC GTGGCGGCCT GGGTGGAGCA GGCGGGGCGG
TAG
 
Protein sequence
MAHHAVNTRA RGLWTALAAA ALMAGCSALP APPPRADVYD FGPGTLAQAP GERGAPLPPI 
ALPEVAVAGP VEGSTAVLYR LAYDDPRHLR PYGQARWSQP PAQLVQQALR DQLGLRRAVL
MGEEGAAQLV DTGKPPAVLR VEIEEFSQVF QAPKASTGVL RLRASLADST QAGEKLVAQR
VFVIQRPAPT PDARGGTHAM AEAAAQAARD VAAWVEQAGR