Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0299 |
Symbol | |
ID | 4669683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 331536 |
End bp | 332294 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639821505 |
Product | ABC transporter-related protein |
Protein accession | YP_968680 |
Protein GI | 120609002 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCATC CCCACGCCAC GCCCCCCACG CCCTACATCG TGGCGGAGAA CGTCTGCAAG GCGTTCGGCA CGCACCAGGT GCTCAAGGAT GTCTCCACCG TGTTCAACAC GGGCGAGGTC ACCGTGATCA TCGGCGCCTC GGGCTCGGGC AAGTCCACGC TGCTGCGCGC CATCAACCGG CTGGAGCCGC ACGACAGCGG CCGCATCGCC ATCGGCGGGG TGGAAGTGAC CGACGACCAG CGCGCCCTGC AGCAGCAGCG CAGCGAGGTC GGCATGGTGT TCCAGCAGTT CAACCTGTTC GGCCACCTGA GCGTGCTCGA CAACGTGACG CTCGCGCCGC GCCGCATCCA CCGCACGCCG CGCGCCGAGG CGAACGAGCA GGCGCTGCAG CTGCTGCGCC GCGTGGGCCT GCGCGACCAT GCCCACAAAT ACCCCTGGCA GCTCTCGGGC GGCCAGCAGC AGCGCGTGGC CATCGCCCGG GCGCTGGCCA TGCGGCCCAA GGTGATGCTG TTCGACGAGC CCACCTCCGC CCTGGATCCG GAAATGGTGC AGGAAGTGCT CGACGTGATG CGCGAACTCG CGCGCGGCGG CATGACCATG ATCGTGGTCA CCCACGAAAT GGGCTTCGCC CGCGAAGTGG CCGACCGCGT GATGTTCTTC GACCAGGGCC GCATCGCGCA CGATGCGCCG CCGGCCGAGT TCTTCGCCAA CCCGGCCAAC GACCGCATTC GCGCCTTCCT GGGGCGCATG GGCGGCTGA
|
Protein sequence | MTHPHATPPT PYIVAENVCK AFGTHQVLKD VSTVFNTGEV TVIIGASGSG KSTLLRAINR LEPHDSGRIA IGGVEVTDDQ RALQQQRSEV GMVFQQFNLF GHLSVLDNVT LAPRRIHRTP RAEANEQALQ LLRRVGLRDH AHKYPWQLSG GQQQRVAIAR ALAMRPKVML FDEPTSALDP EMVQEVLDVM RELARGGMTM IVVTHEMGFA REVADRVMFF DQGRIAHDAP PAEFFANPAN DRIRAFLGRM GG
|
| |