Gene Aave_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0292 
SymbolgatA 
ID4669708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp323896 
End bp325395 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content71% 
IMG OID639821498 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_968673 
Protein GI120608995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CCTCCTCTTC CCTGCACACC CTGGGCGTGG CCGAACTGGC CGCGGCGCTG 
CGCGGCAAGC GCATCTCCGC CGTCGAGGCC GCCCGGCATT TCCTGGCCCG CATCCAGCAG
CACACCGACC TCGGCGCCTT CGTGAGCGTC AACGAGGAGG CCACCCTGGC CCGGGCCCGC
GTCCAGGATG CGGCCATCGC CGCCGGCACG GCCGGCCCGC TGGCGGGCGT GCCCATCGCC
CACAAGGACA TCTTCGTCAC GCGCGACTTC CCCAGCACGG CCGGCTCGAA GATGCTGGCC
GGCTACCAGT CGCCCTTCGA CGCCACGGTC GTCACGCGGC TGGCCGACGC CGGCGCCGTG
ACGCTGGGCA AGCTCAACTG CGATGAATTC GCCATGGGCT CGGCCAACGA GAACTCGGCC
GTCGCCCCCC TGGGCGCCGA TGCGCCCGCC CCGGTACGCA ACCCCTGGGC CACCGACCGC
GTGCCGGGCG GCTCCTCCGG CGGCAGCGCC GTGGCCGTGG CCGCGCGCCT CGCCCCGGCC
GTGACGGGCA CCGACACCGG CGGCTCCATC CGCCAGCCGG CCTCGTTCTG CGGCATCACC
GGCATCAAGC CCACCTACGG CCGTGCCAGC CGCTACGGCA TGATCGCCTT CGCCTCCAGC
CTGGACCAGG CCGGCCCGAT GGCCCGCTCG GCCGAGGACT GCGCCCTGCT GCTCTCGGCG
ATCTGCGGCC CCGACCCGGA CCGCGACTCC ACCAGCCTGG ACGTGCCGGC CGAGGACTTC
AGCGCGAAGC TGGGCGACAG CATCGACGGC CTGCGCATCG GCATCCCGGC AGAGTTCTTC
GGCGAGGGCC TGGCGCCCGA CGTGCGCGCC GCGGTGGATG GCGCGCTCAA GGAATACGAG
AAGCTCGGCG CGAAGCTCGT GCCGATCACG CTGCCGCGCA CCGAGCTGTC CATCCCGGTG
TACTACATCA TCGCGCCGGC CGAGGCCTCG TCCAACCTGA GCCGCTTCGA CGGCGTGAAG
TTCGGCCACC GCGCCAGGGA CTACACCGAC CTGGTGGACA TGTACAAGAA GACCCGCGCC
GAGGGCTTCG GCGACGAGGT CAAGCGCCGC ATCATGATCG GCACCTACGT GCTCTCGCAT
GGCTACTACG ACGCCTACTA CCTGCAGGCG CAGAAGATCC GCCGCATGAT CGCGGATGAC
TTCCAGAACG CCTTCAGGGA CTGCGACCTG ATCGCCGGCC CCGTGGCGCC CACGGTGGCC
TGGAAGCTCG GCGAGCACGG CAACGACCCG CTGGCCGACT ACCTGGCCGA CATCTTCACG
CTGCCCGCGT CGCTCGCCGG CCTGCCCGGC ATGAGCGTGC CCGCCGGTTT CGGCGAAGGC
GGCATGCCCG TGGGCCTGCA GCTCATCGGC AACTATTTCC AGGAAAGCCG GCTGCTGAAC
GCCGCGCACC GCCTGCAGCA GGCGACCGAT TTCCACCTCC GCACGCCCGG AGGCCTGTGA
 
Protein sequence
MSEPSSSLHT LGVAELAAAL RGKRISAVEA ARHFLARIQQ HTDLGAFVSV NEEATLARAR 
VQDAAIAAGT AGPLAGVPIA HKDIFVTRDF PSTAGSKMLA GYQSPFDATV VTRLADAGAV
TLGKLNCDEF AMGSANENSA VAPLGADAPA PVRNPWATDR VPGGSSGGSA VAVAARLAPA
VTGTDTGGSI RQPASFCGIT GIKPTYGRAS RYGMIAFASS LDQAGPMARS AEDCALLLSA
ICGPDPDRDS TSLDVPAEDF SAKLGDSIDG LRIGIPAEFF GEGLAPDVRA AVDGALKEYE
KLGAKLVPIT LPRTELSIPV YYIIAPAEAS SNLSRFDGVK FGHRARDYTD LVDMYKKTRA
EGFGDEVKRR IMIGTYVLSH GYYDAYYLQA QKIRRMIADD FQNAFRDCDL IAGPVAPTVA
WKLGEHGNDP LADYLADIFT LPASLAGLPG MSVPAGFGEG GMPVGLQLIG NYFQESRLLN
AAHRLQQATD FHLRTPGGL