Gene Aave_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0287 
Symbol 
ID4669722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp319244 
End bp320077 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID639821493 
Product2,5-didehydrogluconate reductase 
Protein accessionYP_968668 
Protein GI120608990 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.816728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.941845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAT CCGCTTCCCC ATCCACCCAA CCGCCCGTGC CCCCGTTCGG CCTGGGCACG 
TTCCGGCTCA AGGGCCAGGC CGCCATCGAT TCGGTGGCGA ATGCCCTCGA CCTCGGCTAT
CGCCACGTGG ACACCGCGCA GATCTACGGC AACGAAGCCG AGGTGGGCCA GGCGGTTGCC
GCCAGCGGCG TGGCCCGGGG CGACCTCTAC CTCACCACCA AGGTCTGGAC CGACCATCTC
GCCGCCAGCA GGCTCGTTCC CAGCCTGGAG GAAAGCCTCG AAAAGCTGCG CACGGATTAC
GTCGATCTGG CGCTGATCCA CTGGCCTTCG CCCGGCGGCG CCGTGCCGCT GGCCGAGAGC
CTGGAAGCGC TGGCCGATGC GCGGGCCCGC GGGCTCGTGC GGCGCATCGG CGTATCGAAC
TTCACGGTCG CGCTGCTGCG CGAGGCGGTG GCTGCCGTGG GCGCGGAGTC GATCGCCACG
AACCAGATCG AACTGCACCC CTACCTGCAG AACCGGGCGG TGGTGGATTT CGCGCGCAGC
CAGGGCATCC ACATCACCTC CTACATGACG CTGGGCTACG GCCAGATGCT GCAGGATGCG
GAAATCCAGG CGATCGCGCA GGCATGCGGC GCCACGCCGG CCCAGGTCGC GCTGGCCTGG
GCAATGCAGT CGGGCTTCGC CGTGATTCCT TCGTCCACGC GCCGCGAACA TCTGGCCTCG
AACCTGCGCG CCACGCAGTT GCGGCTGGAG GATGCGCACA TGCAGCGCAT CGCCGCGCTG
GACCGGGGCG GCCGGCTGGT GGACCCGGAA GGGCTGGCGC CGGCCTGGGA CTGA
 
Protein sequence
MQASASPSTQ PPVPPFGLGT FRLKGQAAID SVANALDLGY RHVDTAQIYG NEAEVGQAVA 
ASGVARGDLY LTTKVWTDHL AASRLVPSLE ESLEKLRTDY VDLALIHWPS PGGAVPLAES
LEALADARAR GLVRRIGVSN FTVALLREAV AAVGAESIAT NQIELHPYLQ NRAVVDFARS
QGIHITSYMT LGYGQMLQDA EIQAIAQACG ATPAQVALAW AMQSGFAVIP SSTRREHLAS
NLRATQLRLE DAHMQRIAAL DRGGRLVDPE GLAPAWD