Gene Aave_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0247 
Symbol 
ID4668177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp277097 
End bp277780 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID639821453 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_968628 
Protein GI120608950 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTG CAGACCGCCT GTTCCAGATC GTCCAGCTCG TCCGGGGCCG GCGGCTCTCC 
ACCGCCGAAT TCCTCGCCGC CCGGCTGGAG GTGTCGGTCC GCACCATCTA CCGCGACGTG
GCCGATCTGC AGCGCCAGGG CGTGCCGATC GAGGGCGAGG CGGGGGTAGG CTACCGGCTG
GGCGCGGGGT TCGAGTTGCC GCCGCTCATG TTCAGCCAGG GCGAGGCCGA TGCGCTCGTG
GCTGCCGCGC GGCTCGCGCA GGCCTGGCTC GATCCGGCGA TGGCCCTGCA GATGGAAGGC
GCGCTCGGCA AGATCCTGTC GGTGCTGCCG CCCGCCGCGC GCGCGGCTGC AGAATCCCAG
GCGCTCTATG CACCGGGCCC AGGCATGGAC GACCGCACCC AGGCTCTGCT CATGCCATTG
CGTGAAGCCG TGCAGGCCCG GCGCATCGCA TGTATCGACT ATGCCGACGA ACAGGGCCGC
GCGAGCGCGC GGCGCATCCG GCCGCTGGGC TGCTTTTTCT GGGGCAAGGT CTGGACCGTG
GCCGCCTGGT GCGAACTGCG GCAGGACTTC CGGGGTTTCC GCATCGACCG CATCGCGGCG
CTGCGCGTGC TGGACGAGCG TTTCCCCCTG CAGCCGGGCC GGACGCTGGC AGACCTGCTG
CGGCAGGTCC GGGGCCAGGG CTGA
 
Protein sequence
MRRADRLFQI VQLVRGRRLS TAEFLAARLE VSVRTIYRDV ADLQRQGVPI EGEAGVGYRL 
GAGFELPPLM FSQGEADALV AAARLAQAWL DPAMALQMEG ALGKILSVLP PAARAAAESQ
ALYAPGPGMD DRTQALLMPL REAVQARRIA CIDYADEQGR ASARRIRPLG CFFWGKVWTV
AAWCELRQDF RGFRIDRIAA LRVLDERFPL QPGRTLADLL RQVRGQG