Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0247 |
Symbol | |
ID | 4668177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 277097 |
End bp | 277780 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639821453 |
Product | helix-turn-helix, type 11 domain-containing protein |
Protein accession | YP_968628 |
Protein GI | 120608950 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTG CAGACCGCCT GTTCCAGATC GTCCAGCTCG TCCGGGGCCG GCGGCTCTCC ACCGCCGAAT TCCTCGCCGC CCGGCTGGAG GTGTCGGTCC GCACCATCTA CCGCGACGTG GCCGATCTGC AGCGCCAGGG CGTGCCGATC GAGGGCGAGG CGGGGGTAGG CTACCGGCTG GGCGCGGGGT TCGAGTTGCC GCCGCTCATG TTCAGCCAGG GCGAGGCCGA TGCGCTCGTG GCTGCCGCGC GGCTCGCGCA GGCCTGGCTC GATCCGGCGA TGGCCCTGCA GATGGAAGGC GCGCTCGGCA AGATCCTGTC GGTGCTGCCG CCCGCCGCGC GCGCGGCTGC AGAATCCCAG GCGCTCTATG CACCGGGCCC AGGCATGGAC GACCGCACCC AGGCTCTGCT CATGCCATTG CGTGAAGCCG TGCAGGCCCG GCGCATCGCA TGTATCGACT ATGCCGACGA ACAGGGCCGC GCGAGCGCGC GGCGCATCCG GCCGCTGGGC TGCTTTTTCT GGGGCAAGGT CTGGACCGTG GCCGCCTGGT GCGAACTGCG GCAGGACTTC CGGGGTTTCC GCATCGACCG CATCGCGGCG CTGCGCGTGC TGGACGAGCG TTTCCCCCTG CAGCCGGGCC GGACGCTGGC AGACCTGCTG CGGCAGGTCC GGGGCCAGGG CTGA
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Protein sequence | MRRADRLFQI VQLVRGRRLS TAEFLAARLE VSVRTIYRDV ADLQRQGVPI EGEAGVGYRL GAGFELPPLM FSQGEADALV AAARLAQAWL DPAMALQMEG ALGKILSVLP PAARAAAESQ ALYAPGPGMD DRTQALLMPL REAVQARRIA CIDYADEQGR ASARRIRPLG CFFWGKVWTV AAWCELRQDF RGFRIDRIAA LRVLDERFPL QPGRTLADLL RQVRGQG
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