| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0225 |
|---|
| Symbol | |
|---|
| ID | 4667714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 250686 |
|---|
| End bp | 251642 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639821433 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_968608 |
|---|
| Protein GI | 120608930 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCT TCGACCGCAT GCATACCTTC GTCCGCGTGG CCGAACTCGC CAGCTTCACC
CAGGCGGCCG AAGCGCTCGG CATCCCCAAG GCCAGCGCTT CCACCGCCGT GCAGCAGCTG
GAAACCCAGC TCGGCACGCG CCTGCTGCAC CGCACCACCC GGCGGGTGCA ACTCACGCAG
GACGGGCAGG CCTACTACGA GCGCTGCAAG GACCTGCTGG CCGATGTCGA TGAACTGCAG
TCCATGTTCC AGCACGCCGA CGGCGAGGGC GCGGGGGGCG GCGGCCTGCG CGGGCGCGTG
CGCATCGACA TGTCCACCGG CATGGCGCGC AACGTGGTCG TGCCGCGCCT GCCCGAACTG
CTGGCCCGCC ACTCGGGGCT GGAGGTGGAA CTGAGCAGCA CCGAACGCCG CGTGGACGTG
GTGCGCGAGG GCTTCGACTG CGTGCTGCGC ACCGGCGCCG TGGTGGATGC CAGCCTCGTC
GCGCGACCGC TGGGCCCCGC GCGGCTGGTC AACTGCGCCA GCCCCGCCTA CCTGCGCGCG
CACGGCACGC CCCAAACGCT GGAGGACCTG GGCGACCACC GGCTGGTGCA TTTCGTGAAC
ACCCTCGGCG CGCGCTCCGG CGGCTTCGAG GCCATGGTGG ACGGCACCCT GGCGGCCATC
CCCATGCAGG GAGCCCTCAC GGTGAACAAC GCCGAAGCCT ACATCGCCGG CTGCCTGGCG
GGGTTGGGAA TCATCCAGGT GCCGCGCCTG GGCGTGGTGG ACCTGCTGGC GCAGGGCGCA
CTGGTGGAGG TGCTGCCGCA GCACGCCGCG CCACCGATGC CGCTCACGCT GATGTACGCC
ACCCGCCGCA ATCTGCCGCG GCGCGTGCGG GCGGTGATGG ATTGGCTGGC GGAGGTGGTG
GGGGAGCACC TGGGGCAGGA CGCGGCGGCG ACAAACGGGG AAGCAGCGCC ACCGTGA
|
|---|
| Protein sequence | MNPFDRMHTF VRVAELASFT QAAEALGIPK ASASTAVQQL ETQLGTRLLH RTTRRVQLTQ
DGQAYYERCK DLLADVDELQ SMFQHADGEG AGGGGLRGRV RIDMSTGMAR NVVVPRLPEL
LARHSGLEVE LSSTERRVDV VREGFDCVLR TGAVVDASLV ARPLGPARLV NCASPAYLRA
HGTPQTLEDL GDHRLVHFVN TLGARSGGFE AMVDGTLAAI PMQGALTVNN AEAYIAGCLA
GLGIIQVPRL GVVDLLAQGA LVEVLPQHAA PPMPLTLMYA TRRNLPRRVR AVMDWLAEVV
GEHLGQDAAA TNGEAAPP
|
|---|
| |