Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0217 |
Symbol | treA |
ID | 4667651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 240192 |
End bp | 241898 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639821425 |
Product | trehalase |
Protein accession | YP_968600 |
Protein GI | 120608922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1626] Neutral trehalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCTG CCGCTCCTTC CTGCCGCACC CCGCTGCTGA GCCTGGTGCT CGGCCTGTTG CTCGGCACCG CCGGCACCAC TGCCATGGCG GAGGCCGTGC CAGCGACGAC GCTGACCGCG CCGGCGACGA CGCTGACCGC GCCGGCACCG CCGCCGCAGA CCCCCGACCT GGCCTACCCG GAACTGTTTC AGGCGGTGCA GCAGCACGAG CTGTTCGACG ACCAGAAGCA CTTCGTCGAT GCGCTGCCGC TGCGTGACCC GGCGCTGATC AACGCCGACT ATCTGGCGCA GCGCCAGCAA CCCGGCTTCG ACCTGCGCCG CTTCGTCGCC GCCAACTTCG AGGAATCCGA CCCGGTGCAG ACCGGGGCGA TCCGCCAGGA CACCGGCTTG CGCGAACACA TCGACGCGCT GTGGCCGCGG CTGGTGCGCC GCCAAGTGGA AGTGCCGCCC TACAGCAGCC TGCTGCCGCT GCCGCACCCC TACGTGGTGC CGGGCGGGCG CTTCCGCGAG GTCTACTACT GGGATTCCTA CTTCACCATG CTCGGCCTGG TGGAGAGCGG CGAGCAAGAA CACAGCCGGC AGATGCTGGA CAACTTCGCC TACATGATCG ACACCTACGG GCACATCCCC AACGGCAACC GCACCTACTA CCTGAGCCGT TCGCAGCCGC CGTTCTTCTC GTACATGGTG CAGTTGCAGG CCAAGGTGGA AGGCGATGCC GCCTACGCGC GCTACCTGCC TCAGTTGCAG AAGGAATACG CGTACTGGAT GGAAGGCGCG GAGACCTTGG CCCCAGGCAG CGCGCATGCG CACGTGGTGC GGCTGGCCGA CGGCAGTCTG CTCAACCGCT ACTGGGACGC CCGCGACACA CCGCGCCCGG AAGCCTGGCT GCACGACGTG CGCACCGCTG CCGAGGCCAA GGACCGCCCC GCCGCCGAGG TCTACCGGGA CCTGCGCGCT GGCGCCGAGA GCGGCTGGGA CTATTCCAGC CGCTGGCTCG GCGACCGCAA GACCCTGGCC AGCATCCGCA CCACCGCCAT CGTCCCGGTC GACCTGAACA GCCTGCTCTA CCATTTGGAG ACTACCCTGG CGCTCGCCTG CGCCAAGAAC CCGGACGTGG CCGGCTGCAA CACCGACTAC GCCGCCCTGG CCAGCGCGCG CAAGACCGCG ATCGACAAGC ACCTGTGGAG CGATGCCGGC TACTACGCCG ACTACGACTG GCAGCAGCGC CGGCTGCGCG GGCAGGTCAC CGCGGCGGCG CTGTTCCCGC TGTTCGTCGG CGCCGCCTCG CCGGCACGGG CCAAGCGCAG CGCCGACACC GTGCAGGCGC AGCTGCTGCG CCCCGGCGGC CTGGCGACTA CGAGCCTGCA CACCGGCCAG CAGTGGGACG AACCCAACGG CTGGGCGCCG CTGCAATGGA TCGCCGTGGA TGGCCTGCGC CGCTACGGCC AGGACGCGCT GGCGCAGTGC ATCGGCACCC GCTTCCTGAC GCGGGTGCAG GCGCTGTTCG CGCAGCAGCA CAAGCTGGTG GAGAAGTACG CGGTGGACGG GCAGGCCAAG GGCGGCGGCG GCGGCGAGTA CGCCCTGCAG GACGGCTTCG GCTGGACCAA CGGCGTGACC TTGCTGCTGA TGGACCTCTA CGCGGCGCCC GCCGCCGCGC GGGCAGCGTC GCACGCGCAA GCGCAGACGG AAGCGGTCGC GCCCTGA
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Protein sequence | MIPAAPSCRT PLLSLVLGLL LGTAGTTAMA EAVPATTLTA PATTLTAPAP PPQTPDLAYP ELFQAVQQHE LFDDQKHFVD ALPLRDPALI NADYLAQRQQ PGFDLRRFVA ANFEESDPVQ TGAIRQDTGL REHIDALWPR LVRRQVEVPP YSSLLPLPHP YVVPGGRFRE VYYWDSYFTM LGLVESGEQE HSRQMLDNFA YMIDTYGHIP NGNRTYYLSR SQPPFFSYMV QLQAKVEGDA AYARYLPQLQ KEYAYWMEGA ETLAPGSAHA HVVRLADGSL LNRYWDARDT PRPEAWLHDV RTAAEAKDRP AAEVYRDLRA GAESGWDYSS RWLGDRKTLA SIRTTAIVPV DLNSLLYHLE TTLALACAKN PDVAGCNTDY AALASARKTA IDKHLWSDAG YYADYDWQQR RLRGQVTAAA LFPLFVGAAS PARAKRSADT VQAQLLRPGG LATTSLHTGQ QWDEPNGWAP LQWIAVDGLR RYGQDALAQC IGTRFLTRVQ ALFAQQHKLV EKYAVDGQAK GGGGGEYALQ DGFGWTNGVT LLLMDLYAAP AAARAASHAQ AQTEAVAP
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