Gene Aave_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0217 
SymboltreA 
ID4667651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp240192 
End bp241898 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content70% 
IMG OID639821425 
Producttrehalase 
Protein accessionYP_968600 
Protein GI120608922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1626] Neutral trehalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG CCGCTCCTTC CTGCCGCACC CCGCTGCTGA GCCTGGTGCT CGGCCTGTTG 
CTCGGCACCG CCGGCACCAC TGCCATGGCG GAGGCCGTGC CAGCGACGAC GCTGACCGCG
CCGGCGACGA CGCTGACCGC GCCGGCACCG CCGCCGCAGA CCCCCGACCT GGCCTACCCG
GAACTGTTTC AGGCGGTGCA GCAGCACGAG CTGTTCGACG ACCAGAAGCA CTTCGTCGAT
GCGCTGCCGC TGCGTGACCC GGCGCTGATC AACGCCGACT ATCTGGCGCA GCGCCAGCAA
CCCGGCTTCG ACCTGCGCCG CTTCGTCGCC GCCAACTTCG AGGAATCCGA CCCGGTGCAG
ACCGGGGCGA TCCGCCAGGA CACCGGCTTG CGCGAACACA TCGACGCGCT GTGGCCGCGG
CTGGTGCGCC GCCAAGTGGA AGTGCCGCCC TACAGCAGCC TGCTGCCGCT GCCGCACCCC
TACGTGGTGC CGGGCGGGCG CTTCCGCGAG GTCTACTACT GGGATTCCTA CTTCACCATG
CTCGGCCTGG TGGAGAGCGG CGAGCAAGAA CACAGCCGGC AGATGCTGGA CAACTTCGCC
TACATGATCG ACACCTACGG GCACATCCCC AACGGCAACC GCACCTACTA CCTGAGCCGT
TCGCAGCCGC CGTTCTTCTC GTACATGGTG CAGTTGCAGG CCAAGGTGGA AGGCGATGCC
GCCTACGCGC GCTACCTGCC TCAGTTGCAG AAGGAATACG CGTACTGGAT GGAAGGCGCG
GAGACCTTGG CCCCAGGCAG CGCGCATGCG CACGTGGTGC GGCTGGCCGA CGGCAGTCTG
CTCAACCGCT ACTGGGACGC CCGCGACACA CCGCGCCCGG AAGCCTGGCT GCACGACGTG
CGCACCGCTG CCGAGGCCAA GGACCGCCCC GCCGCCGAGG TCTACCGGGA CCTGCGCGCT
GGCGCCGAGA GCGGCTGGGA CTATTCCAGC CGCTGGCTCG GCGACCGCAA GACCCTGGCC
AGCATCCGCA CCACCGCCAT CGTCCCGGTC GACCTGAACA GCCTGCTCTA CCATTTGGAG
ACTACCCTGG CGCTCGCCTG CGCCAAGAAC CCGGACGTGG CCGGCTGCAA CACCGACTAC
GCCGCCCTGG CCAGCGCGCG CAAGACCGCG ATCGACAAGC ACCTGTGGAG CGATGCCGGC
TACTACGCCG ACTACGACTG GCAGCAGCGC CGGCTGCGCG GGCAGGTCAC CGCGGCGGCG
CTGTTCCCGC TGTTCGTCGG CGCCGCCTCG CCGGCACGGG CCAAGCGCAG CGCCGACACC
GTGCAGGCGC AGCTGCTGCG CCCCGGCGGC CTGGCGACTA CGAGCCTGCA CACCGGCCAG
CAGTGGGACG AACCCAACGG CTGGGCGCCG CTGCAATGGA TCGCCGTGGA TGGCCTGCGC
CGCTACGGCC AGGACGCGCT GGCGCAGTGC ATCGGCACCC GCTTCCTGAC GCGGGTGCAG
GCGCTGTTCG CGCAGCAGCA CAAGCTGGTG GAGAAGTACG CGGTGGACGG GCAGGCCAAG
GGCGGCGGCG GCGGCGAGTA CGCCCTGCAG GACGGCTTCG GCTGGACCAA CGGCGTGACC
TTGCTGCTGA TGGACCTCTA CGCGGCGCCC GCCGCCGCGC GGGCAGCGTC GCACGCGCAA
GCGCAGACGG AAGCGGTCGC GCCCTGA
 
Protein sequence
MIPAAPSCRT PLLSLVLGLL LGTAGTTAMA EAVPATTLTA PATTLTAPAP PPQTPDLAYP 
ELFQAVQQHE LFDDQKHFVD ALPLRDPALI NADYLAQRQQ PGFDLRRFVA ANFEESDPVQ
TGAIRQDTGL REHIDALWPR LVRRQVEVPP YSSLLPLPHP YVVPGGRFRE VYYWDSYFTM
LGLVESGEQE HSRQMLDNFA YMIDTYGHIP NGNRTYYLSR SQPPFFSYMV QLQAKVEGDA
AYARYLPQLQ KEYAYWMEGA ETLAPGSAHA HVVRLADGSL LNRYWDARDT PRPEAWLHDV
RTAAEAKDRP AAEVYRDLRA GAESGWDYSS RWLGDRKTLA SIRTTAIVPV DLNSLLYHLE
TTLALACAKN PDVAGCNTDY AALASARKTA IDKHLWSDAG YYADYDWQQR RLRGQVTAAA
LFPLFVGAAS PARAKRSADT VQAQLLRPGG LATTSLHTGQ QWDEPNGWAP LQWIAVDGLR
RYGQDALAQC IGTRFLTRVQ ALFAQQHKLV EKYAVDGQAK GGGGGEYALQ DGFGWTNGVT
LLLMDLYAAP AAARAASHAQ AQTEAVAP