Gene Aave_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0199 
Symbol 
ID4667933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp223732 
End bp224961 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID639821410 
Productmuconate and chloromuconate cycloisomerase 
Protein accessionYP_968585 
Protein GI120608907 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR02534] muconate and chloromuconate cycloisomerases 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA TCCCCTCCGC CGGCCTGCGC ATCGAGCGCA TCGAGGCGCG CATCCTCGAC 
ATCCCCACCA TCCGGCCGCA CAAGTTCTCG TTCGGAGCGA TCCACCGCCA GAGCCCGGTG
GTAGTGCAGC TGTGGCTGGC GGACGGCGCC TGCGGCTTCG GCGAGGCCGC CACCATCGGC
GGCCCCTCGT GGAACGAGGA ATCGCCCGAG ACCATCCTGC ACGCCATCAC GCAGTACCTC
GGCCCCGCCG TGGCCGGGCA GGACGCGGGC CGCTTCGAGC AGCTGCTGGC GCGCATGGAC
GCCGTCTGCA AGGGCAATCG CTTCGCCAAG AGCGCCGTGG AAATGGCCGC CATCGACGCC
GTGGCCCGTT CCCTGGGCCT GCCCGCCTGG CAGCTGCTGG GCGGCAAGCA GCACGAAAGC
CTGCCCCTGG CCTGGACGCT CGCCAGCGGC GATTCCGCCC GCGACGTGGA AGAGGCCGAG
CGCATGCTGG AGGCCCGCCG CCACCGCATC TTCAAGCTCA AGATCGGCGC GCGCGCCCCG
CAGGACGACG TGGCCCATGT CACCCGCATC GCCCGCGGCC TGGACGGGCG CGCCGGCATG
ACCGTGGACA TCAACCAGGC CTGGGACGGC AACACCGCGC GCCGCTACGT GCCGCAGCTC
ATCGATGCGG GCGTGAGCCT GATCGAGCAG CCCGTCGCGC AATGGAACGT GGAGGCCCTG
CGCCAGCTCA CCGCCGGCCT GCCCGCCGGC GCGCTGGTGA TGGCCGACGA AACCGTCTGC
ACGCCGCAGG ACGCCATGCT GCTGGCGCGG CAGGGCGCCT GCCATGTCTT CTCCCTGAAA
GTCGCCAAGC ACGGCGGCCT GCTGCGCACC CGCGCAGTCG CCGCCGTGGC CGAGGCCGCG
GACATCGGCT GGTACGGCGG CACCATGCTG GAAACGTCGC TGGGCAGCGC CGCATCGGCC
CACGTTTTCG CCACGCTGCC CGGCACGCAC CACAACTGCG AGCTGTTCGG CCCGCAACTG
CTGGTGGACG ACATCGTCGC CACGCCCATG ACCGTGCGCG ACTTCGCGCT GCAATTGCCC
GATGGCCCCG GCTTCGGCGT GGAGGTGCTG CCCGAAGCAC TGCGCCGTTT CGACCGCGCC
CGCGAAGGCC TCGCGCCCGT GCACGTGGAC ATGGGCCGCC AGGCCGCCGC CCCGGCCGCG
GAGCCGGCGC CTGCCGCCCC CTCTGCCTGA
 
Protein sequence
MTAIPSAGLR IERIEARILD IPTIRPHKFS FGAIHRQSPV VVQLWLADGA CGFGEAATIG 
GPSWNEESPE TILHAITQYL GPAVAGQDAG RFEQLLARMD AVCKGNRFAK SAVEMAAIDA
VARSLGLPAW QLLGGKQHES LPLAWTLASG DSARDVEEAE RMLEARRHRI FKLKIGARAP
QDDVAHVTRI ARGLDGRAGM TVDINQAWDG NTARRYVPQL IDAGVSLIEQ PVAQWNVEAL
RQLTAGLPAG ALVMADETVC TPQDAMLLAR QGACHVFSLK VAKHGGLLRT RAVAAVAEAA
DIGWYGGTML ETSLGSAASA HVFATLPGTH HNCELFGPQL LVDDIVATPM TVRDFALQLP
DGPGFGVEVL PEALRRFDRA REGLAPVHVD MGRQAAAPAA EPAPAAPSA