Gene Aave_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0196 
Symbol 
ID4667942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp221428 
End bp221892 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID639821407 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_968582 
Protein GI120608904 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCA CTTCCGCCCC TTCCGTTGCC CGTTCCTCCG GCCTGCAGGG CCCCCTGCGC 
CGCGTGGTCT ATGTCACGCT CTACGAACTC ATCGCCATCG CGTTCGCCAC GTTCGGGATG
ATGTGGGCCA CCGGCCAGGG CGCGGGCCAT TCGGGCGCCG TGGCCGCGAT CGCCTCGGGC
ATCGCCATCG TGTGGAACGT GGCGTTCAAC TGGGCGTTCG AGCGCTGGGA ATCTCGCCAG
GCAGTGCGCG GGCGCAGCAT GGCGCGGCGC GTGGCGCACG CCATCGGCTT CGAGGGCGGC
CTGGCGATGG TCCTCGTGCC CGTGCTGGCC TGGTGGTTCG GCATCGGGCT GTGGGAAGCC
TTCGTGATGG ACATGGGCCT GCTGCTGTTC TTCCTGGGCT ACACCTTCGT CTTCAACTGG
GTGTTCGACC GCGTGTTCGG CCTGCCGGCC TCGGCGCGCC ACTGA
 
Protein sequence
MLSTSAPSVA RSSGLQGPLR RVVYVTLYEL IAIAFATFGM MWATGQGAGH SGAVAAIASG 
IAIVWNVAFN WAFERWESRQ AVRGRSMARR VAHAIGFEGG LAMVLVPVLA WWFGIGLWEA
FVMDMGLLLF FLGYTFVFNW VFDRVFGLPA SARH