Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0196 |
Symbol | |
ID | 4667942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 221428 |
End bp | 221892 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639821407 |
Product | transmembrane pair domain-containing protein |
Protein accession | YP_968582 |
Protein GI | 120608904 |
COG category | [S] Function unknown |
COG ID | [COG4125] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCA CTTCCGCCCC TTCCGTTGCC CGTTCCTCCG GCCTGCAGGG CCCCCTGCGC CGCGTGGTCT ATGTCACGCT CTACGAACTC ATCGCCATCG CGTTCGCCAC GTTCGGGATG ATGTGGGCCA CCGGCCAGGG CGCGGGCCAT TCGGGCGCCG TGGCCGCGAT CGCCTCGGGC ATCGCCATCG TGTGGAACGT GGCGTTCAAC TGGGCGTTCG AGCGCTGGGA ATCTCGCCAG GCAGTGCGCG GGCGCAGCAT GGCGCGGCGC GTGGCGCACG CCATCGGCTT CGAGGGCGGC CTGGCGATGG TCCTCGTGCC CGTGCTGGCC TGGTGGTTCG GCATCGGGCT GTGGGAAGCC TTCGTGATGG ACATGGGCCT GCTGCTGTTC TTCCTGGGCT ACACCTTCGT CTTCAACTGG GTGTTCGACC GCGTGTTCGG CCTGCCGGCC TCGGCGCGCC ACTGA
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Protein sequence | MLSTSAPSVA RSSGLQGPLR RVVYVTLYEL IAIAFATFGM MWATGQGAGH SGAVAAIASG IAIVWNVAFN WAFERWESRQ AVRGRSMARR VAHAIGFEGG LAMVLVPVLA WWFGIGLWEA FVMDMGLLLF FLGYTFVFNW VFDRVFGLPA SARH
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