| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0178 |
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| Symbol | |
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| ID | 4666844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 197994 |
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| End bp | 199292 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639821389 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_968564 |
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| Protein GI | 120608886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.207633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG TTGCCGAACG GACCTGTTCA ACGGAACACG AGATGACAGA AGCTTCTTCT
TTCGCTGCCT CCCCACCACG CACCGGCCCG CTGGCGGGGG TGCGGGTGCT CGATCTCACC
TCGGTGATCA TGGGGCCGTT CGCCACGCAG ATCCTCGCGC AGCTGGGTGC GGAGGTGGTG
AAGGTGGAGA CGCCCGAGGG GGACAACATG CGGCACGTGG GACCGATGCG GCACGCGGGC
ATGGGGCACA TCTTTCTGCA TGCGAACGCG GGCAAGCAGA GCATCGCGCT GGACCTGAAG
CACCCGGACG GGCGCGAGGC GGCGCTGCGG CTGGCCGAGG GCTGCGACGT GCTCATCAGC
AATGTGCGGC CGCAGGCGCT GGCCCGGCTG GGGCTGGATC ACGGGGCGGT GAGCGCGCGC
AATCCCCGCA TCATCCACGT GAGCTGCTGC GGCTTCGACC AGGACGGGCC GGACGCCGCG
CGTCCTGCCT ACGACGACCT GATCCAGGGC GCCACCGGCA TTCCCTGGCT CATGCAGCGC
TACGGCGCGC CGGAGCCGTC GTATGCGCCC ACCACGCTGT CGGACCGGGT GACCGGGCTG
CACGCGGTGT ATGCCGTGAC GGCGGCGCTC TACGCCCGCG AGAAGACGGG ACGGGGCCAG
GCCGTGGTCG TGCCGATGTT CGAGGCCATG GCGCAGTTCG TGCTGGGCGA CCACATGGCG
GGCCTCACCT TCGAGCCGCC GCTGGGCGAA CCCGGCTACG CGCGCCTGCT CACGGCCCAC
CGCAAGCCCT ACGCCACGGC CGACGGCATG CTCTGCGTGC TGATCTACAA CGACAAGCAC
TGGCGAAGCT TTTTCGCGGC GATCGGCGAG GACGGCGATG GAGGCCTGGC GCACGACCCG
CGCTTCGCCA CGCATGGCGC GCGCGCCGCG CACATCGACG CCGTGTATGC CGAGGTGGCG
CGCATCCTGC GCACGCGCAC CACGGCCGCA TGGCGGGCGG TGCTGGACGC GGCCGACGTG
CCCAACATGC CCATGAATTC CCCGGCCGAC CTGCTCGGCA ACGCGCAACT GCGCGCGACC
GGCTTCCTGC ACGACACGGA GCATCCCAGC GAGGGACCGA TGCACGCCAT GGCGCACCCC
ACGCGCTGGT CCGCCACGCC CCCGGCGCGC GACCTGCCCC CTGCGCCGCG CCTGGGCGAA
CACACGCGCA GCCTGCTGGC CGGGGCCGGC TACACGCCCG CGCAGATCGA CGCCCTTCTG
GCGCAGGGCG CGTGCCTCGC TGCCGGAGAC ACCGCATGA
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| Protein sequence | MGDVAERTCS TEHEMTEASS FAASPPRTGP LAGVRVLDLT SVIMGPFATQ ILAQLGAEVV
KVETPEGDNM RHVGPMRHAG MGHIFLHANA GKQSIALDLK HPDGREAALR LAEGCDVLIS
NVRPQALARL GLDHGAVSAR NPRIIHVSCC GFDQDGPDAA RPAYDDLIQG ATGIPWLMQR
YGAPEPSYAP TTLSDRVTGL HAVYAVTAAL YAREKTGRGQ AVVVPMFEAM AQFVLGDHMA
GLTFEPPLGE PGYARLLTAH RKPYATADGM LCVLIYNDKH WRSFFAAIGE DGDGGLAHDP
RFATHGARAA HIDAVYAEVA RILRTRTTAA WRAVLDAADV PNMPMNSPAD LLGNAQLRAT
GFLHDTEHPS EGPMHAMAHP TRWSATPPAR DLPPAPRLGE HTRSLLAGAG YTPAQIDALL
AQGACLAAGD TA
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