Gene Aave_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0147 
Symbol 
ID4665873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp162127 
End bp162825 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID639821358 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_968533 
Protein GI120608855 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.006322 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTCG TGTTTCCTGT TCCTCCTACC GTGGCCGTGC CTGTCGTGGG CACATCGGAT 
GCCTTCGCCG TGCGGCGCGT CTATTGCGTG GGGCGCAACT ACGCGGCCCA TGCGCGGGAG
ATGGGGTTCG ATCCGGACCG CGAGCCGCCG TTCTTCTTCT GCAAGCCGGC CGATGCGGTG
CTTCCCGTGG CCTATGGCGA GACGCTGCGG CTGCCGTATC CGGTGCGCAC CGACAACTTC
CATTACGAGG CGGAGCTGGT GGTCGCCATC GGCAAGGCGG GCAGCGACAT CGCCCGCGAG
AACGCGCTGG AGCATGCCTG GGGCTACGCC GTGGGCCTGG ACATGACCCG CCGCGACCGG
CAGATGGAGA TGCGCCAGAT GGGCCGCCCG TGGGAGATCG GCAAGGCCTT CGATGCCTCC
GCGCCGATCG GCCCGATCCA CCGCGCGAGC GACGTGGGCC ACTTCGAGCA GGCCGGCCTC
TGGCTCACCG TGAACGGCGC GGACCGACAG CGCAGCGACG TGTCGCACCT GATCTGGTCG
GTGGCCGAGA CCATCGCGGA CCTCTCCACG TATTTCCGCC TGGAGCCCGG CGACCTGATC
TACACCGGCA CGCCCGAAGG CGTGGGCCCG GTGGTGCGCG GCGACCGCAT GGTGGTGGGC
GTGGAGCGCC TGGGCGAGCT GGCGGTGGAC GTGGTCTGA
 
Protein sequence
MAFVFPVPPT VAVPVVGTSD AFAVRRVYCV GRNYAAHARE MGFDPDREPP FFFCKPADAV 
LPVAYGETLR LPYPVRTDNF HYEAELVVAI GKAGSDIARE NALEHAWGYA VGLDMTRRDR
QMEMRQMGRP WEIGKAFDAS APIGPIHRAS DVGHFEQAGL WLTVNGADRQ RSDVSHLIWS
VAETIADLST YFRLEPGDLI YTGTPEGVGP VVRGDRMVVG VERLGELAVD VV