Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0141 |
Symbol | mdoD |
ID | 4666223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 151062 |
End bp | 152666 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639821352 |
Product | glucan biosynthesis protein D |
Protein accession | YP_968527 |
Protein GI | 120608849 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0359657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAC CCCAACGACG CCATTTCCTC CGCACCCTCG GCCACGGCGC CGCGCTGGCC ACCGCAGGCG GCCTGGGCCT GAACTGGACC CAGGCCTTCG CGGCCCTCAA GCCCCTGGGC CAGCCCCAGG CCTTCGATTT CGCGGCGCTC AAGGGCCAGG CCCGCGCCCT GGCTGCCAAG GCCTACGAGC CGCCGAAGGA CACCATCCCC CCCTCGGTGT CCAAGCTCGA CTGGGACCAG TACCAGTCCA TCCAGTTCCG CGGCGACCAC GCCCTATGGG CCGACGAGAA GCTGCGCTTC CAGGCCAAGT TCTTCCACCT GGGCCTGTTC TTCAAGAAGC CGGTGCGCAT GTTCGAGCTC GCGGACGGCA AGGCCCAGGA ACTGGCCTAC GACCCCGAGA TGTTCAACTA CGGCAAGAGC GGCCTGAAGC CCGGCGACCT GCCGCCGGAT CTGGGCTTCG CGGGCTTCCG CCTCAACTTC CACACCGACC CGGTGCGCGA CGTGGCCGCC TTCCTCGGCG CCAGCTACTT CCGCGCGGTG GGCGGGGAAT GGCAGTACGG CCTCTCCGCC CGGGGCCTGG CCATCGATAC CGGCATGCAG CGCCCGGAGG AATTCCCGGA CTTCACCGCC TTCTACCTGG AGCGCCCCGC GCCCGGCTCC AATACCGTCG TCGTGCTGGC CCTGCTGGAT TCGCCCAGCA TCGCCGGCGC CTACCGCTTC GCGATCACGC CGGGCGACAC GCAGGTGATG GAGATCGATG CCGCCCTGTA TCCGCGCAAG GCCATCGAGC GCCTGGGTAT CGCGCCCTGC ACCAGCATGT TCCAGCACGG CGAGAACGAT CGCCGCATGG CCAACGACTG GCGCCCCGAG ATCCATGACT CCGACGGCCT GCAGATGTGG CGCGGCAACG GCGAATGGGT CTGGCGGCCG CTCACCAACC CGCCGGCGCT GCAGTTCAAC GCCTTCGCCG ACCAGGGCCC GCGCGGCTTC GGCCTCGTGC AGCGCGACCG CAATTTCGAC CACTACCAGG ACGACGGCGT CTTCTACGAG CGCCGGCCCT CGCTCTGGGT GGAGCCGAAG TCCGACTGGG GCGCGGGCTC CATCCAGCTG GTGGAGATCC CCACCATCGA CGAAACCTTC GACAACATCG TCGCCTTCTG GAACCCCGAC CGCAAGCCGC AGGCCGGCGA GGAACTGCTG ATCGGCTACC GCCTGTTCTG GGGCGCCCAC CCGCCGGCCC AGTCCCCGCT GGCGCGCTGC GTGGCCACCT GGACGGGCCT GGGCGGCGTG GTCGGCCAGC CGCGCAAGTA CTTCTCCTGG CGCTTCGCGG TCGATTTCGC CGGGGAGAAC CTCGTGGCGC TGGGCCGCGG CGCCAAGGTC GAGCCGGTGA TCACCGCCAG CCGCGGCAAG ATCGAGATCA CCTCCGCGCG GCCGCAGGAC GCCATCCAGG GCTGGCGCGC CATGTTCGAC ATCAAGCCCG AGGACGACAG CACCGCGCCC ATCACCATCC GCATGTTCCT GCGCGGCGAG AACGGCGCGC CGCTCACCGA GACGTGGCTC TACCAGTGGG TGCCGCCCGC CCCGGCGGAC CGCCGGCTCT CCTGA
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Protein sequence | MQKPQRRHFL RTLGHGAALA TAGGLGLNWT QAFAALKPLG QPQAFDFAAL KGQARALAAK AYEPPKDTIP PSVSKLDWDQ YQSIQFRGDH ALWADEKLRF QAKFFHLGLF FKKPVRMFEL ADGKAQELAY DPEMFNYGKS GLKPGDLPPD LGFAGFRLNF HTDPVRDVAA FLGASYFRAV GGEWQYGLSA RGLAIDTGMQ RPEEFPDFTA FYLERPAPGS NTVVVLALLD SPSIAGAYRF AITPGDTQVM EIDAALYPRK AIERLGIAPC TSMFQHGEND RRMANDWRPE IHDSDGLQMW RGNGEWVWRP LTNPPALQFN AFADQGPRGF GLVQRDRNFD HYQDDGVFYE RRPSLWVEPK SDWGAGSIQL VEIPTIDETF DNIVAFWNPD RKPQAGEELL IGYRLFWGAH PPAQSPLARC VATWTGLGGV VGQPRKYFSW RFAVDFAGEN LVALGRGAKV EPVITASRGK IEITSARPQD AIQGWRAMFD IKPEDDSTAP ITIRMFLRGE NGAPLTETWL YQWVPPAPAD RRLS
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